Gene Xfasm12_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2027 
Symbolpgk 
ID6121111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp2119805 
End bp2121250 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content55% 
IMG OID641649977 
Productphosphoglycerate kinase 
Protein accessionYP_001776525 
Protein GI170731092 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTTG CCTGTGTGGG GTTGGGTGGC GAGGAGAGGA GGGGCATTGC AAGGGATGCG 
GGCATATTTT GGTGTGTTGT GCGCGGTATC ACTGGCATAG GGGGTGTGAG TGATGGCCGT
TTGCCCGTTT TGGCGGGTGT TGGCACTGCA TGGCGGTGCT CGCAGGCTGT TGCTGTCATC
GGAGGTAGGT TGGTGGGATG GACGCTTGGT GTTTACCTAC TGCCAGATGA ACCAGGACAA
TGGTGTTTTG TTTCTATAAA GGAAATCGAG ATGTCCATCG TCCGCATGAC TGATCTCGCT
TTATCCGGTA AACGCGTACT GATTCGTCAG GACTTGAATG TACCGATTGA TCAAGGTCTT
ATTACTTCCG AGCAGCGCAT TATTGCTTCG CTTCCGACGA TCCGTGTAGC GCTGGAGCGT
GGTGCGGCGG TCATGGTGAC TTCGCATCTG GGCCGTCCGA AGGAGGGCGT GTGGAGTGAG
GAGGATTCAT TGGCACCCGT GGCGAAGCGC TTGTCTCAAT TGTTGGGGAT TGAGGTTCCG
TTGCGTCGCG ATTGGGTGGA TGGCGTGCAG GTTGCGCCAG GGCAGTTGGT GTTATTGGAA
AACTGCCGAA TGAATGTCGG CGAAGCTGAG AATGACGAGG CGTTGGCAAG GAAGTATGCG
GCGTTATGTG ATGTGTTCGT GATGGATGCG TTTGGCACTG CGCACCGTGC CCAGGCATCA
ACGCATGGGG TGATCTGTTG TGCTGCGATT GCTGCCGGTG GTCCGTTGTT GATGGCTGAG
TTGGATGCTT TGAGCCGGGG ATTGAAGCAT CCGGTGAAGC CGCTGCTGGC GATTGTGGGG
GGCAGTAAGG TATCGACGAA ATTGGAGTTG CTTTCCAATT TGGTGAATAA CGTTGAGCAA
TTGATTACGG GGGGAGGCAT TGCCAATACG TTCCTTGCCG CAGCCGGTTA CTCCATCGGT
AAGTCACTGT ATGAGGCGGA TTTGATCGAG ACTGCTCGGG AGATTATTAC TGTGGCGAAA
GCGCGTGGCG CTGAGATTCC GTTACCCACG GATGTGGTTG TTGCCAAGCA GTTTTTGCCT
GGAGTCACGG CAACGGTGAA GACGGTGGAT GCAATCGTTG CGGATGATCT TATTTTGGAC
ATTGGTCCGC AGACGGCACG GCACTATGCT GCCTTGATTG AAACGGCGGC TACGGTGGTC
TGGAATGGTC CAGTGGGTGT GTTTGAGTTC GATGCCTTCA GCAAGGGGAC CGAGGTGTTA
GCGCGGGCCG TTGCTGCCTC GTCTGCGTTT TCGATTGCCG GTGGCGGCGA TACCTTGGCT
GCTATTGATA AGTATGGTGT TGCGGACCAG ATCAGTTACA TCTCCACAGG CGGCGGTGCT
TTTCTGGAGT TTTTGGAAGG TAAGACGTTG CCGGCGGTGG CTGCGTTGCA GGCGCGCAGC
GGATAA
 
Protein sequence
MSFACVGLGG EERRGIARDA GIFWCVVRGI TGIGGVSDGR LPVLAGVGTA WRCSQAVAVI 
GGRLVGWTLG VYLLPDEPGQ WCFVSIKEIE MSIVRMTDLA LSGKRVLIRQ DLNVPIDQGL
ITSEQRIIAS LPTIRVALER GAAVMVTSHL GRPKEGVWSE EDSLAPVAKR LSQLLGIEVP
LRRDWVDGVQ VAPGQLVLLE NCRMNVGEAE NDEALARKYA ALCDVFVMDA FGTAHRAQAS
THGVICCAAI AAGGPLLMAE LDALSRGLKH PVKPLLAIVG GSKVSTKLEL LSNLVNNVEQ
LITGGGIANT FLAAAGYSIG KSLYEADLIE TAREIITVAK ARGAEIPLPT DVVVAKQFLP
GVTATVKTVD AIVADDLILD IGPQTARHYA ALIETAATVV WNGPVGVFEF DAFSKGTEVL
ARAVAASSAF SIAGGGDTLA AIDKYGVADQ ISYISTGGGA FLEFLEGKTL PAVAALQARS
G