Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2002 |
Symbol | |
ID | 6121086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 2085680 |
End bp | 2086750 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641649954 |
Product | hypothetical protein |
Protein accession | YP_001776502 |
Protein GI | 170731069 |
COG category | [R] General function prediction only |
COG ID | [COG3858] Predicted glycosyl hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00113016 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACTCCC CCCGTATGAC ACAACGTCCC TTCGCCCTAC TTCTAACACT CATTTTTGCA CTCCCTGCGA CCGCAAAAAA TCCAACGGCC CTGTTCTATT TGATGAACAG CGAGAAATCG ACCAACTCCT TCCTTGCCCA CGCCGACAAA ATCGACACAC TCGTCCCCAC CTGGTACAGA GTAGACCCAA CGGGAGTTGT CAACGGCACA CCTAACGAAC ACGTCTACCG CATCGCCCAA CAAAAGAAAA TCACCCTCAC CCCAATCCTC TCCATGTCCG GCGGCCGCGA CGGCTTTCAC ACACTTCTGC ATGACGAAGC AGCAAAAACC CGGATGAACA CATTCCTGGT AAAAGAAAGC AAAGCACGCG GCTACAAAGG CTTCCAATTC GACTTTGAAA ACATCGCCCA AACCGACCGT GGCGCCTATA CCTTGATGGT CAAACAGACC GCCGAAGCCC TACATAAAGC GGGCATGACC CTATCAATCG CCGTCGTCCC CAATGCACCT GGCCACCCAG AAGAAGGAGG CGACTTCTCC AAATGGATGT GGGAATACTG GTGCGGTGTC TACGACCTGA AAGCACTCGG TCAAGCCGCC GACCTCATCA GCCTGATGAC CTACGACCAA CACACCCGTT GGACCACCCC CGGCCCCGTT GCCGGCATGC CCTGGACCAA AAAGCACTTG GAATACGCAC TGACCCAGGT ACCGAAAGAA AAACTGTCTC TGGGAATCCC CTCCTATGGC TACCGCTGGT TCACCGGTAA CCCAGTCAGA AAAGACGGCA CTGAAAACTC CAACATTTCC GGCACCTACA TTGACGCCGA CAAATCCTTC CCATTAGCCA TCGCACAAAA AGCCAACGTG CAATGGGATC CTATAGAACA AGAATCATGG TTCTACTTTT ACCGCGACAA CATGCGCGAA TGGGTCTCCC GCCCTGACGC ACACAGCTTC CGTGCACGCT ATGACCTGGT GAAACAGAAT GGACTCCAGG GTTTCAGCTG CTGGGTGCTT GGTGCCGAAG ACCCAAAAAT GTGGGATGAA CTGCCCCTCG CCACCCACTA A
|
Protein sequence | MDSPRMTQRP FALLLTLIFA LPATAKNPTA LFYLMNSEKS TNSFLAHADK IDTLVPTWYR VDPTGVVNGT PNEHVYRIAQ QKKITLTPIL SMSGGRDGFH TLLHDEAAKT RMNTFLVKES KARGYKGFQF DFENIAQTDR GAYTLMVKQT AEALHKAGMT LSIAVVPNAP GHPEEGGDFS KWMWEYWCGV YDLKALGQAA DLISLMTYDQ HTRWTTPGPV AGMPWTKKHL EYALTQVPKE KLSLGIPSYG YRWFTGNPVR KDGTENSNIS GTYIDADKSF PLAIAQKANV QWDPIEQESW FYFYRDNMRE WVSRPDAHSF RARYDLVKQN GLQGFSCWVL GAEDPKMWDE LPLATH
|
| |