| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1976 |
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| Symbol | |
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| ID | 6121059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 2063028 |
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| End bp | 2063882 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641649927 |
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| Product | membrane protein |
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| Protein accession | YP_001776476 |
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| Protein GI | 170731043 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000011268 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAGC CATGCTTTGC TACAGTAAAG CGCGTATTTC CAACTATCTT TCATAACCGA
CTCTATGCAA TGAAGCATTT CCTACTGTGT GTCGCCACTC TCCTCTTTGT CGGCTGCGGC
CCTTCTGACA GCAACCATGA TCACCTCAGT ATTGCCGCCA CTGCGGTACC GCATGCTGAG
ATCTTGGAGT TTGTGAAGCC AACGCTGGCC AAACAAGGCA TCCGACTCGA CATCCGTGTA
TTCAACGATT ACGTGCAACC CAATGACCAG GTTGCTCAAA AACAAATCGA CGTTAACTAC
TTTCAGACCG AGCCTTATTT GCAAGCATAC AACCGCAGCC GCAACACGCA TCTGATCACC
GTCGTTGGTG TACACATTGA GCCGTTCGGT GCCTACTCAC GCCGCTATAC AGCACTCGCA
TCACTACCCA AAGGAGCAGA AATAGCGATC CCCAACGATC CGAGTAACAA CAGCCGCGCA
CTTATCCTAC TGCACCAAGC AGGGCTGATT AAACTCAAAG ATCCTAAAAA CATGCTAGCG
ACTCAGCGCG ACATCCTTGA GAATCCTAAG CTATTCAAAT TCCGCGAATT AGACGCAGCC
ATGCTACCGC GCGTGCTTGA CCAGATCGAC TTGGTACTCA TCAACACCAA TTACGCACTG
AGTGCCGGGC TGAAACCAAA TCAAGATGCA TTGGCAATCG AAAACAAAGA TTCCCCGTAT
GTAAATTATC TGGTCTCACG TGAAGACAAC AAAGACGACC CACGGGTACA AAAGCTGGCA
AAAGCACTAA CCAGCCCTGA AGTAAAACGC TTTATCGATA AAAAGTATGG CGGCGCGGTG
TTACCAGCGT TCTAA
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| Protein sequence | MSQPCFATVK RVFPTIFHNR LYAMKHFLLC VATLLFVGCG PSDSNHDHLS IAATAVPHAE
ILEFVKPTLA KQGIRLDIRV FNDYVQPNDQ VAQKQIDVNY FQTEPYLQAY NRSRNTHLIT
VVGVHIEPFG AYSRRYTALA SLPKGAEIAI PNDPSNNSRA LILLHQAGLI KLKDPKNMLA
TQRDILENPK LFKFRELDAA MLPRVLDQID LVLINTNYAL SAGLKPNQDA LAIENKDSPY
VNYLVSREDN KDDPRVQKLA KALTSPEVKR FIDKKYGGAV LPAF
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