Gene Xfasm12_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1898 
Symbol 
ID6120178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp1979701 
End bp1980327 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content52% 
IMG OID641649857 
Producttranscriptional regulator 
Protein accessionYP_001776406 
Protein GI170730973 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTCA CCGCTCCAAA CAGAAAATGG AGCTCCATTC AGCCTGATGC AATGCCGGAC 
TCCCCTTTGA CAGACCCCGC TGCACGGCCC TCGCCGAGCG AAAACTACCT CCTGATCAAC 
GCGTACTCGA TGCACCCGGA GTCCCCCTTA CTCTCCGTGA CCCGTCGTAT CGCCGATAGC 
GGCTGCAACC TGATAGAAGC CCGGCTAGCA ACAGTCGGTC GTGACGTGTC CATAACAACG 
CTAGCAACCG GATCCTGGGA CGCTGTTGCC AAACTTGAAG CGATGCTCTC ACGACTGGAA 
CGCGAGGAAG GATTGAAACT GATCTGGTAC CGTACTGGTG CCAAACAAAC TCAGTCCAAC 
CTACTGCCAT ATATCGTCGA AGTCATTGCC GCCGACAAAC AAGGCATTTT GTTTCAGTTG 
GCCGATTTCT TCGACCGCCA GGGAATTACC ATAGAAAACC TTCAAAGCAC CCGCTATCGG 
GCAATGCAAA CCGGCGCAGA AATGTTCTCG GCACAAATCA CTATCGGTAT CCCTGCAAAC 
ATGCATATAG CTGCACTACG CGATGATTTT CTAGAGTTCT GCGATCACCT CAATCTTGAT 
GCCATTCTAG ATCCGATGAA ATTCTGA
 
Protein sequence
MLVTAPNRKW SSIQPDAMPD SPLTDPAARP SPSENYLLIN AYSMHPESPL LSVTRRIADS 
GCNLIEARLA TVGRDVSITT LATGSWDAVA KLEAMLSRLE REEGLKLIWY RTGAKQTQSN 
LLPYIVEVIA ADKQGILFQL ADFFDRQGIT IENLQSTRYR AMQTGAEMFS AQITIGIPAN 
MHIAALRDDF LEFCDHLNLD AILDPMKF