Gene Xfasm12_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1770 
Symbol 
ID6121008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1836374 
End bp1837768 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content52% 
IMG OID641649742 
Producthypothetical protein 
Protein accessionYP_001776294 
Protein GI170730861 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACG GTAGTGAGAG GGTCCTGCGT GAGCGCACAG TAGTAGATGC CAGAATTTAT 
CCAGCGAACT GTTTGGATCT ATTGTCGCCA ATGGAGGCGG CACGGCTGCG CGATATTTCT
AATGGAGGGA TACACGAGTC GTTGCGCCGT TGCGCATTGG CGGTGCTGAC CAGTGGGAGC
GGTTTGGATG ATCCACGTGC TGTCTGCGAT CTATACCCTG ATTTTGATAT TCAAGTGATA
CAGCGTGATC GTGGTATGGC GATTGAGCTG AGCAATGCGC CGGCAATGGC ATTCGTGGAC
GATGAAATCA TCTGTGGCGT GGCTGATTTG CTGTTTGCAG TGGTGCGTGA TTTTGCCTAT
ATGGCCATCG ATCTTGGATC GGGTGATGTC GTTGCTTTAA AGACCACTGA TGGGATTACG
AATGCGGTGT TTGCGCAGTT GCGCAACGCG CGCATTTTGC AGGTATCTGC AGAACCTAAT
CTTGTCGTGT GCTGGGGAGG TCACTCGATC TCACGCAATG AATACCTGTA CGCCAAGCAA
GTGGGCTATG CGCTTGGTTT GCGTGGCTTG GACATTTGTA CAGGGTGTGG TCCAGGTGCG
ATGAAGGGGC CAATGAAAGG GGCTACTATC GCTCACGCCA AGCAGCGTCG CCACGATAAG
CGTTATATCG GTATCAGCGA ACCAGGCATC ATCGCTGCCG AATCGCCAAA TCCCATTGTG
AATCACTTGG TCATCATGCC GGATATTGAG AAGCGCTTGG AGGCTTTTGT TCGCCTTGCT
CACGGCATCA TTGTGTTTCC TGGTGGTGTG GGAACGACTG AAGAGATTTT GTATTTGCTG
GGTTTGCTGT TACGTGAGGA GAATCACGGG TTGCCGTTTC CGTTGATCCT GACAGGTCCG
GCGAGCGCTG CACCGTATTT TGAGCAGATT GATCACTTTA TCCGTTTGAC GTTGGGCAAC
CAGGCCGCGT CATGCTATGA GATCGTGATT GGGGACCCGG TTGCTGTAGC ACGCAAAATC
AGCGATGGCA TCCGCCAAGT TCGCGAATTC CGTAAAGAAC GCAAGGATGC TTATTACTTC
AATTGGTCCT TACATATTCC GTTGGAGTTT CAACAGCCGT TTATCCCTAC CCATGAGGCT
ATCGCTGCGT TGGACTTGCA TCATAGTCGG CCGGTGCATG CATTAGCGGC AGACTTGCGC
CGTGCGTTCT CCAGCATTGT TGCTGGCAAC GTCAAGGAAG AAGGCATCCG TCAGGTCGAG
CAGTTCGGCC CATTCCGGAT TCATGGTGAT CCGTCGATGA TGCAAGCGTT GGATGCGCTG
TTGTCCGCGT TTGTTGAACA GAAGCGGATG AGTCTTTCTG GGAAGTATGA ACCTTGTTAT
CAGGTCTTTT CTTGA
 
Protein sequence
MKHGSERVLR ERTVVDARIY PANCLDLLSP MEAARLRDIS NGGIHESLRR CALAVLTSGS 
GLDDPRAVCD LYPDFDIQVI QRDRGMAIEL SNAPAMAFVD DEIICGVADL LFAVVRDFAY
MAIDLGSGDV VALKTTDGIT NAVFAQLRNA RILQVSAEPN LVVCWGGHSI SRNEYLYAKQ
VGYALGLRGL DICTGCGPGA MKGPMKGATI AHAKQRRHDK RYIGISEPGI IAAESPNPIV
NHLVIMPDIE KRLEAFVRLA HGIIVFPGGV GTTEEILYLL GLLLREENHG LPFPLILTGP
ASAAPYFEQI DHFIRLTLGN QAASCYEIVI GDPVAVARKI SDGIRQVREF RKERKDAYYF
NWSLHIPLEF QQPFIPTHEA IAALDLHHSR PVHALAADLR RAFSSIVAGN VKEEGIRQVE
QFGPFRIHGD PSMMQALDAL LSAFVEQKRM SLSGKYEPCY QVFS