Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1768 |
Symbol | |
ID | 6121006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1835237 |
End bp | 1835719 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641649740 |
Product | putative type IV pilus assembly protein PilV |
Protein accession | YP_001776292 |
Protein GI | 170730859 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4967] Tfp pilus assembly protein PilV |
TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT GTTCCAATCA TCGTTGCCAT TGGGCTGCGC CTCCCCTTGG GGTGTCGTTG ATTGAGGTGT TGATCGCGTT GCTGGTTCTG GGCATCGGTT TGTTGGCTTT CGCACTGCTT CAAACCATGA ATGTGCGTTT CACTAAAAGT GCCCAGCAGC GAACGATCGC CAGTAACTTA GCTTACGAGT TGCTAGACAT CATGCGTAGC CAGCGCAGTA CGGTGGGTTA CTACGGTGCG ATCACTTATG GAAGTTTTGA TGGTGTTGAT GGCACCGACT GCAATCATTC TGAAAATGCT ACGCCGGTTG CCAACATGGC GCGTTGGCGT TGTGAGGTGG TGAGTGCACT GCCAGATGGC CGTGCACAGG TGAATCTTGC GACGAATGGG GAAGTGACGG TGACGATCCG TTGGGGTGAT CAACACTGGG AGACCGATGT GAATAAGCAA TCCACCACTT TCAATCTGAC TAGTGTGTTA TGA
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Protein sequence | MKKCSNHRCH WAAPPLGVSL IEVLIALLVL GIGLLAFALL QTMNVRFTKS AQQRTIASNL AYELLDIMRS QRSTVGYYGA ITYGSFDGVD GTDCNHSENA TPVANMARWR CEVVSALPDG RAQVNLATNG EVTVTIRWGD QHWETDVNKQ STTFNLTSVL
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