Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1176 |
Symbol | |
ID | 6120396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1242686 |
End bp | 1244866 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641649195 |
Product | phage-related DNA polymerase |
Protein accession | YP_001775757 |
Protein GI | 170730324 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0140258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACCG CGCAGCCACC CGCACCCATC CTATGGGGGG ATCTAGAGAC GTACTCCCCC GTACCGATTG CGCATGGCGT GCATGCGTAT GCTGAGCAAG CCGAGCTATT GCTGTTTGCT TACGCGATCG GCAACGGTCC GGTGCAGGTG TGGGACTGCA CGGCCACGGC AACGATGCCT GAGGAGCTGT CGGCTGCGTT GCACAACCCC GCGGTGCTGC TGTACTTCCA CAACTCCCAT TTTGACCGGA CCGTGCTACG CCATTGCGGC ATCGACATCC CCTTGGAGCG CTGGCGCGAT TCAATGGCCC AGGCCTTGGC CCATTCGCTG CCTGGGGCGC TAGGCACGTT ATGCGAGCTG CTGCGCGTTC CTGTGGAGCA AGCCAAGGCC AAGGACGGCA AACGGCTCGT TGCACTGTTT TGCAAACCGC GCCCTACCCA CTGCACGTTG CGCCGTGCCA CACGTGACAC CCATCCGACC GACTGGGCAC AGTTTGTGGA GTACGCCAGG CGCGATGTGG CAGCCATGCG GGACGTGGTG AAGCGGTTGC CGTCCCACAA CTACTCAGGG GCGGAACTTG CACTGTGGTT TCTGGACCAA ACCATTAACG ACCGAGGCGT TTTGGTCGAT ACGGACTTGG CGCAGGCCGC CATCGGCGCC GTGGAACGCG CCAAGTGCAC ATTAGCCCAC CGTACCGAGG CGTTGACTGG CGGGGCGGTG CAGGCGGCGA CCCAGCGCGA TGCACTGTTG CACCACCTGA GCACCGAGCA CGGCGTGGCG TTGCCGGACA TGCAGCAACA CACGGTAGAG CGTTGCCTTG ACGATCCGCT GTTGCCAGAG ACGGTGCGCG AACTGCTGTC CATCCGCAGG CAAGCCAGCA CCACCAGCAC CGCTAAGTAC CAGGCGCTAC TGAACTGCAC CAGCCGCGAT GGCCGCCTGC GCGGCACGCT GCAATTTAAC GGGGCCAGTC GCACCGGGCG CTGGGCGGGG CGGCTGTTTC AGCCGCACAA CCTGCCCCGC CCCACGCTCA GCCAGCCAGT GATCGCCGTT GGCATTGATG CCATGAAAGC CGGTTGTGTG GATGTGGTCT TTGACGATGT CATGGCGCTG ACCAGCAGCG CGCTGCGCAG TTGTCTGATT GCACCAACCC ATAAAAAGCT GGTCGTGGCC GATCTGTCCA ACATTGAAGG CCGCGTATTG GCGTGGCTGG CCGGTGAAAC CCCCAAGCTG CACGCGTTTG GTGATTTTGA TACGTGCCAA GGGGTGGACG GTACATGGCA CAGCGGCGAG GCCATCACTC ACGGTGCGCT GCGCGGCGCA CCGATCACCC TGCAACGTAA TGCCGAGCAC GAGCCTATCC GCCAAGGGGA CGACATTTAC AAGCGCGCCT ACGCTCATTC GTTCGGGATA GCGCCCCAGG CCGTGACCAA GGAGCAACGC CAGATTGGCA AAGTGCAGGA ATTGGCCTTG GGGTATGGCG GCGGTGTCGG GGCCTTTGCC GCCTTTGCGG CGATGTATCA CATTGATTTG GAGGCGATGG CCGAGCAGGC CGCCTTACCA CCCCTGCTGC TTCAGGAGGC CGTGGAAGCG CTCCAGTGGA CTAAGGCGAA CCAACGTCCC ACCTTCGGCC TCTCAGATCG CGCATGGTTG GCCTGCGATG TGTTTAAGCG CGCATGGCGC AACGCGCATC CGGCCATTGC GGCGTTTTGG CAGGCGTTGC AGTTCGCGGC CACAGACGCC ATCGGCCACC CCGAAACGGC GCACACCTGC TGCGGTATCA CAGTGCAGTA CAGCCGTGCA TGGCTGCGTC TGCGTCTGCC GTCGGGGCGG GTGCTTTACT ACGCCGCTCC CAGAGTCGAT GAGCACGGCG CGCTGTCCTA CATGGGCACG CATCCGATCA CGCGCAAATG GACGCGCATC ACCACCTACG GCGGCAAGCT GGTCGAGAAC ATCACCCAAG CTGTCAGCCG CGACGTGTTG GCCGCCTGCA TGCCTGCGAT TGAAGCCGCC GGTTACGCGA TCGTTTTAAC CGTGCACGAC GAAATGATTA CCGAAGCCGA TGACAACGCC GCTTTCAATG CCGCGCACTT GGCCGCACTC ATGGCAACAC CGCCGCCCTG GGCGCAGGGG TTGCCCTTAG CGGCGGAAGG CTTCCAAACC CACCGGTATA GGAAGCAATG A
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Protein sequence | MATAQPPAPI LWGDLETYSP VPIAHGVHAY AEQAELLLFA YAIGNGPVQV WDCTATATMP EELSAALHNP AVLLYFHNSH FDRTVLRHCG IDIPLERWRD SMAQALAHSL PGALGTLCEL LRVPVEQAKA KDGKRLVALF CKPRPTHCTL RRATRDTHPT DWAQFVEYAR RDVAAMRDVV KRLPSHNYSG AELALWFLDQ TINDRGVLVD TDLAQAAIGA VERAKCTLAH RTEALTGGAV QAATQRDALL HHLSTEHGVA LPDMQQHTVE RCLDDPLLPE TVRELLSIRR QASTTSTAKY QALLNCTSRD GRLRGTLQFN GASRTGRWAG RLFQPHNLPR PTLSQPVIAV GIDAMKAGCV DVVFDDVMAL TSSALRSCLI APTHKKLVVA DLSNIEGRVL AWLAGETPKL HAFGDFDTCQ GVDGTWHSGE AITHGALRGA PITLQRNAEH EPIRQGDDIY KRAYAHSFGI APQAVTKEQR QIGKVQELAL GYGGGVGAFA AFAAMYHIDL EAMAEQAALP PLLLQEAVEA LQWTKANQRP TFGLSDRAWL ACDVFKRAWR NAHPAIAAFW QALQFAATDA IGHPETAHTC CGITVQYSRA WLRLRLPSGR VLYYAAPRVD EHGALSYMGT HPITRKWTRI TTYGGKLVEN ITQAVSRDVL AACMPAIEAA GYAIVLTVHD EMITEADDNA AFNAAHLAAL MATPPPWAQG LPLAAEGFQT HRYRKQ
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