Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1084 |
Symbol | |
ID | 6120709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1169310 |
End bp | 1170458 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641649108 |
Product | hypothetical protein |
Protein accession | YP_001775672 |
Protein GI | 170730239 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2946] Putative phage replication protein RstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000848597 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGTC GCTCTTCTTC TTCTGATTCT GCGGTTTATG TTAATTTTTT GGAGCGTGAG CGTCGCGCTG ATGTTGAGAA GGCTGCTCGC TTATATGAGA CGCGTCGCGA TCGTGTAAAC CCGTCTTATG TGTTTCCTGC TCCGTCCGGT GAAAAGGGGT TAGGCCCGAA CAGTAATACG GGCCAAAAGG GTGTTGCTTC GTCTTATCCT GTTTCTATTG ATTATTTGAC GGTTGTTTTT AGTTATGCCC GTTTGGCAGA GGCGGGTTAT TTTGATGAGC CTCGTTTTCT TCTTTACTTG TTATTTGGTC TGAATCCTGA TGATGTCATT GTGGGTTCTC ATACTTCTGT GCGTTGGCAT TTTTATAATT CAAGTGCTTC TATTATAGAT TCTAATGGTG ATCTAGTCGG CAAGATTGGT TGGGATGGTA ATCGGGATTC GTATTGTATT AGTTTGACGG GTTCGGCTTG CCGTTATATT CATGATTGGT CAAAGGTAAA ACGTTCATTG GCTTCTTTGG ATGCGCGTAT TACTCGCTGT GATGTGGCTT ATGATGATTA TGACGGTACA TTGGGGACGG TACGACATCA TGAGGCGCTT GCGCGTGAGC ATTTAGCTCC TGCTGGTGGT TGTCTGTTGT TTTCTTCTGG TGGGACTCCT CCGCGTACGC GTTTTTTGGA TGATCATGGG GGAGGGTCTG GGTGTACGTT GTACGTGGGG CAACGTGGGC ATAAGCAATT GTGTATTTAT GAGAAAGGGA AACAGCTTGG TGTGGCTGAG TCTCCCTGGG TGCGTTATGA GGTGCGTTTA TATGCCAAGC ATGCTGTGAT CCCTTTTGAT TTATTAGAAG AACCCATGCG TTATTTGCGT GGTTCTTATG ATTATTTGTG CAAGTTATTT TCTGTTGTTG TTGCTTCTCC CGTGAGTCGC ATTCGGACGG TGGTAAAGCA TGTGGAGGCG ACAGGTGAGG CGTTGGTCCG CTGGCTGCGT CGTCAGGTAG GGCCTGCGTT AGGGGTGTTG CGTCAAGCGT TGGGGTGTGG GTTTTCTGAT TTTATTGTTG ATCGTGTGGA GCGTGAGGGG TTGCCTTCTC GTTTTCGGCG TATTTGTAGG GGGGGGATTT ACCTGCGTAT TTGCGAGAGA CGTTATTAG
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Protein sequence | MSRRSSSSDS AVYVNFLERE RRADVEKAAR LYETRRDRVN PSYVFPAPSG EKGLGPNSNT GQKGVASSYP VSIDYLTVVF SYARLAEAGY FDEPRFLLYL LFGLNPDDVI VGSHTSVRWH FYNSSASIID SNGDLVGKIG WDGNRDSYCI SLTGSACRYI HDWSKVKRSL ASLDARITRC DVAYDDYDGT LGTVRHHEAL AREHLAPAGG CLLFSSGGTP PRTRFLDDHG GGSGCTLYVG QRGHKQLCIY EKGKQLGVAE SPWVRYEVRL YAKHAVIPFD LLEEPMRYLR GSYDYLCKLF SVVVASPVSR IRTVVKHVEA TGEALVRWLR RQVGPALGVL RQALGCGFSD FIVDRVEREG LPSRFRRICR GGIYLRICER RY
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