Gene Xfasm12_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0952 
Symbol 
ID6121436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1031139 
End bp1032137 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content58% 
IMG OID641648994 
Producthypothetical protein 
Protein accessionYP_001775558 
Protein GI170730125 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.47256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACATA ACCGCTACTA TCAAGGCCCA TTAAGCGACC ACTTCGACGG CCTACGCTTC 
TTCAATCCAG GTCAACCCAA CACCGACAAA CCATTCAGCG ACCTGTTGCG CTGGCGCTGG
GAGAGTCGCC ACCTGCCCCC TTGGCGCGAC GTACCACCCA CCCACGTCGC TACCCCCATC
GCACGCAGCC AGCACCCCAT CATCACCATG ATTGGCCACT CCAGCGTGCT GATACAAATT
GCAGGACTCA ACCTACTCGT TGACCCGGTA TGGTCCGAAC GGGTCAGCCC ACTCTCCTGG
TTGGGTCCGC GACGTTGGAA CTCCCCTGGT ATCGACTTCA ACGCATTACC GCCCATCGAT
TATGTACTCA TCACCCACAA CCACTACGAT CATCTGGACC TGACCACCCT GGCACGCCTC
CAGATAGCCC ATGCCCCCCA AGTGGTCACC CCACTGGGCA ACGATGCCAT CATCCGCAAG
CGCGTCCCTG ACCTGCATAT ACACACCCTT GATTGGTGGG ATTCAATACA ACTGACAAAC
GAACCCACCA AAATCAGCGT CGTCCCCGCC TACCACTGGT CGGCACGCGG CTTACGAGAC
AGGCGCATGG CACTGTGGGG CGGTTTCCAC CTACGCACCC CCCAAGGGAG CCTCTACATT
GCTGGCGACA CCGCCTATGG GAATGGCAGC ATCTTCCACG CAATAGCGCA ACGCTGCGGT
GCTCCAGATC TGGCCATCCT GCCTATCGGC GCCTATGCGC CACGCTGGTT CATGCACAAC
CAACACATCG ATGCCGTGGA AGCCGTGCAG ATTATGTGCG ACGTAGGCGC ACACCAAGCC
TTGGGAGTGC ATTGGGGCAC CTTCCGCCTG ACCGACGAAG CCGTAGAAGA ACCACCTACC
CTCTTAGCTC AAGCCCTAAA AGCCAAAGGC ATTCCTGCAA CCCGCTTCAT TGCGATGACA
CCCGGTCAAA GAAATCGGTG GAAAGCCTCC GAACGGTAA
 
Protein sequence
MPHNRYYQGP LSDHFDGLRF FNPGQPNTDK PFSDLLRWRW ESRHLPPWRD VPPTHVATPI 
ARSQHPIITM IGHSSVLIQI AGLNLLVDPV WSERVSPLSW LGPRRWNSPG IDFNALPPID
YVLITHNHYD HLDLTTLARL QIAHAPQVVT PLGNDAIIRK RVPDLHIHTL DWWDSIQLTN
EPTKISVVPA YHWSARGLRD RRMALWGGFH LRTPQGSLYI AGDTAYGNGS IFHAIAQRCG
APDLAILPIG AYAPRWFMHN QHIDAVEAVQ IMCDVGAHQA LGVHWGTFRL TDEAVEEPPT
LLAQALKAKG IPATRFIAMT PGQRNRWKAS ER