| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0689 |
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| Symbol | hemE |
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| ID | 6119374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 740407 |
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| End bp | 741471 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641648752 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001775317 |
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| Protein GI | 170729884 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAAA ACGATCGCCT ACTGCGTGCC CTACGACGCG ACACCGTGGA CCGTACCCCA
ATCTGGCTGA TGCGCCAGGC CGGACGCTAT CTGCCGGAAT ACCGTGCTGC CCGGCAACAC
GCCGGCAGCT TCCTCAAAAT GGCAAAAACT CCTGAACTGG CCTGTGAAAT CACCCTGCAA
CCACTGCGCC GCTTCCCACT AGACGCGGCG ATTCTGTTCT CCGACATCCT CATGATCCCC
GACGCGATGG GCCTAGAACT GCACTTCATT GAAGGTGAAG GGCCACGCTT GGGCAAACCA
ATCCGCGACG CCGCAGCCAT CACACAACTC GCCGTGCCGG ATATGGAAAC CGAACTACGC
TACGTCATGG ACGCCGTACG ACTGATCCGT AAAGAACTGG ACAACAGCGT CCCGCTCATT
GGTTTCTCCG GCAGCCCATG GACACTGGCC TGCTACATGA TCGAAGGAGG AGGCAGCAAA
GAATACGCAC ACATTAAAGC CATGGCATTC AACGCACCGG ACGTACTGCA TCAACTGCTA
AACACCGTCA CCGACGCAGT GATCAGCTAC TTGGCGGCAC AGCGCGCCGC TGGCGCACAA
GCACTACAGG TCTTCGATAC CTGGGGAGGC ATCCTGTCGC CCACGATGTA CCGAACATTC
TCACTGCCCT ACTTAACGCG GATTGCACGC GAACTAGAAC GCGGCACCGG TACCGAACAT
ACCCCCCTGG TGTTGTTCGG CAAAGGCAAT GGACCTTACA TCGCAGAACT CGCCATGAGC
GGTACCGAAG CCGTTGGCGT GGACTGGACC ATCGAATTAG AAGACGCCGC ACGCCGCAGC
AACGGCCAAG TGGCATTACA AGGCAACCTC GACCCAGCCA CACTGTACGG AACCCCAAAC
AACATCGCAC GTGAAGTACA ACGCACCCTG GACAGCTACG CAGCCGGTAA CGGTGGCTCA
CGCGAGGGAC ATGTCTTCAA CCTTGGCCAC GGCATGACCC CTGGCATGGA CCCTGATCAC
GTCAGCGCGC TTGTCGAAGC CGTGCAGCGC TTAAGCCGTC GCTGA
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| Protein sequence | MLKNDRLLRA LRRDTVDRTP IWLMRQAGRY LPEYRAARQH AGSFLKMAKT PELACEITLQ
PLRRFPLDAA ILFSDILMIP DAMGLELHFI EGEGPRLGKP IRDAAAITQL AVPDMETELR
YVMDAVRLIR KELDNSVPLI GFSGSPWTLA CYMIEGGGSK EYAHIKAMAF NAPDVLHQLL
NTVTDAVISY LAAQRAAGAQ ALQVFDTWGG ILSPTMYRTF SLPYLTRIAR ELERGTGTEH
TPLVLFGKGN GPYIAELAMS GTEAVGVDWT IELEDAARRS NGQVALQGNL DPATLYGTPN
NIAREVQRTL DSYAAGNGGS REGHVFNLGH GMTPGMDPDH VSALVEAVQR LSRR
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