Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0638 |
Symbol | |
ID | 6119323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 696223 |
End bp | 696756 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641648706 |
Product | fimbrillin |
Protein accession | YP_001775271 |
Protein GI | 170729838 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.37134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGC AGCAAGGTTT TAATGTCATT GAACTAATGA TCTTAATCGT CATTATCGCC GTCTTAACAG CGATCACACT GCCGATATAT CAGTATTACA TCGCTAAATC TCAAGTCACC GCGGCACTGA TCGATATTAC ACCCGGCAAA GTGCAAACCG AGGTGCGCCT GGCAGGTGGC GTGCCTGGCA CGACATCCCC CAATGATATT GGCCTGCATG ACACCACCAC TCGGTGCCAT CACATTGATG TCAGTGTCGA TAGCGCAGCC GCAGAGAGCA GAACTGACTC CCTCGGGCAT CACACAACAA CCCTCAAAGC CCCAACCTCA ACTATCACAT GCACGATCAA TGGAAATAAC TCCGTCAATC ATAAATTTAT CCAGTGGGTT CGTACGGCCG ATTTAAATTG GGTAAGCGCT GATAACGGCG GTAATGATTT AAAAGGCAAA TGGTTTTGCA TCACAAACGT TGCTGAAGCG TTGCGGCCAA TCACCTGCGC AGTCGCCCTG CCTCAAATGC CAATAGGGAC GTAA
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Protein sequence | MKKQQGFNVI ELMILIVIIA VLTAITLPIY QYYIAKSQVT AALIDITPGK VQTEVRLAGG VPGTTSPNDI GLHDTTTRCH HIDVSVDSAA AESRTDSLGH HTTTLKAPTS TITCTINGNN SVNHKFIQWV RTADLNWVSA DNGGNDLKGK WFCITNVAEA LRPITCAVAL PQMPIGT
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