| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0558 |
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| Symbol | |
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| ID | 6120321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 606114 |
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| End bp | 608237 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641648627 |
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| Product | colicin V secretion ABC transporter ATP-binding protein |
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| Protein accession | YP_001775193 |
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| Protein GI | 170729760 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCCG TTTTGCAATC TGAGGTCAGT GAGTGTGGTT TGGCTTCGCT GGCGATGGTA
GCCAATGCGC ATGGTAAGCA TCTGACCCTA TCCCAGTTGC GTCAGCGTTT TCCCTCATCT
CTCAAAGGCG CCAAACTGAC TCATTTGGTC CATATTGCGC AGCAGCTAGG CTTTTCTACG
CGTCCACTAC GCCTGGATAT GGAAGATCTG GGTAAGCTTA AGTTACCTTG TATTCTGCAC
TGGGATCTCA ATCACTTTGT AGTACTGGCA AAAGTTGGGA CCACTAAGGT CACCATTTAC
GATCCAGCCA TCGGCAAGCG CAAGCTTTCA CTCAATGAAG TGTCAAAGTA TTTCACTGGC
ATAGCGCTTG AATTGACAAC AACGACCGAA TTCAAGCAGC AGAAACCACC GCCTTCAATT
TCAGCACGTC AGTTGACCGG TCCAATCCGA GGGTTGTGGA GGGCATTGGC GCAGATTCTG
TTGCTCTCGC TGGCGTTACA GGTCTTTGTA GTGCTCTCGC CTTTCTACAT GCAATGGGTC
GTGGATCAGG TACTGGTCTC GGCTGATCGC GATTTGCTGG TGGTACTGGG GTTGGGCTTC
GGATTGGTAT TGTTGCTTCA GATCGCTATC GGTTTGTTCC GTAGCTGGTC GGTGATTTAC
CTGTCGTCAA GGCTTGGCTT GCAATGGATG GGTAACGTAT TCGCACATCT ACTTAAACTT
CCATTGGAGT ACTTTGAAAA GCGCCATCTT GGAGACTTGA CTTCTCGCAT GTCTTCGGTC
CAATCGATCC AGAAAACGCT GACCACCAGT TTTGTTGAAG CGATTATTGA TGGGCTGATG
ACGCTCGTCA CGCTTGGTTT GATGCTCGTT TACAGTTGGA AACTGGCGTT GGTAACCTTG
GTAGCCGTGG TGTTGTACAT GGTTATCCGT GCTGTTTCTT ATTGGCCAGT ACGTGACTGC
ACCGAACAGC AATTAGTCGT TGGAGCAAAA CAGCAGACCC ATTTGCTGGA ATCATTACGT
GGTATTCAAA GTTTGAAAGT GGCATGTGAA GAGTCTCTAC GTCGCTCTAC TTACGAGAAT
CTACTCAATG ACACGGTTAA CCAAGAAGTG CGGCTGGCAC GCATGTCATT GGGTTTCTCA
ACTGCTAGTC AGCTTGTGTT CGGTCTGGAG CGTATTGCAG TGATCTGGTA CGGTGCTACA
TTGGCATTGA GCAATGTGTT CTCGGTTGGC ATGTTGATTG CCTATTTATC CTACAAAGAT
CAATTTGCCA GTCGAATCTC TAGCTTGATT GATAAATGGG TTGAGTTCCG TATGTTGCGT
CTGCATGGTG AACGCTTGGC TGATATCGTC TTGACCCCTC CGGAGGAAGA TTATGAATTG
CCGGAAATGC AGCTACCGAA AAAAGAACCA GATATTGAAG TGGAAGGATT GTCGTTCCGT
TATGGTGAAG ACGAACCATG GGTGCTGAAA GATTGCAGCT TCAAGGTTGC CGCTGGCGAG
TCGGTGGCTA TTATCGGTGC TTCTGGTTGC GGTAAAACGA CACTGATGAA GTTGCTGCTT
GGGTTGCTCA AACCTACCGC AGGTACCATA CGTATCAGTG GGCGTGATTT GCATAAATTC
GGTACACGCA ATGTACGTTC GATTGTTGGT GCGGTGATGC AAGATGACCA ACTCTTTGCA
GGGAGTGTCG CTGATAACAT TAGTTTCTTT GATCCTGATT TCGACCTGGA GCGTATTGAA
GCGGCAGCGA AGCTAGCCGC GATTCATGAA GACATCGCCG CGATGCCAAT GGGATACCAC
GCGTTGATCG GTGATATGGG CAGTGCTCTA TCCGGTGGAC AGAAGCAACG TGTGATTCTA
GCTCGTGCGC TTTATCGTCA GCCCAAGTTG CTGTTCTTAG ACGAGGCAAC GAGCCACTTG
GATGTTATGC GAGAGCGTTT AGTGAATGAT GCAGTACACC AATTAAAACT AACCAAAGTC
ATCGTTGCAC ATCGCCCCGA AACCATTGCG AGTACGGATC GTGTCGTGAT CTTGGATCAT
GGACGTATCG TGCAAACAGT GGCAATGCCA GAAGATCGTG ATGACTCAAT CCAAATAGTG
CATAACACAA TACAGAGTAC GTGA
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| Protein sequence | MRSVLQSEVS ECGLASLAMV ANAHGKHLTL SQLRQRFPSS LKGAKLTHLV HIAQQLGFST
RPLRLDMEDL GKLKLPCILH WDLNHFVVLA KVGTTKVTIY DPAIGKRKLS LNEVSKYFTG
IALELTTTTE FKQQKPPPSI SARQLTGPIR GLWRALAQIL LLSLALQVFV VLSPFYMQWV
VDQVLVSADR DLLVVLGLGF GLVLLLQIAI GLFRSWSVIY LSSRLGLQWM GNVFAHLLKL
PLEYFEKRHL GDLTSRMSSV QSIQKTLTTS FVEAIIDGLM TLVTLGLMLV YSWKLALVTL
VAVVLYMVIR AVSYWPVRDC TEQQLVVGAK QQTHLLESLR GIQSLKVACE ESLRRSTYEN
LLNDTVNQEV RLARMSLGFS TASQLVFGLE RIAVIWYGAT LALSNVFSVG MLIAYLSYKD
QFASRISSLI DKWVEFRMLR LHGERLADIV LTPPEEDYEL PEMQLPKKEP DIEVEGLSFR
YGEDEPWVLK DCSFKVAAGE SVAIIGASGC GKTTLMKLLL GLLKPTAGTI RISGRDLHKF
GTRNVRSIVG AVMQDDQLFA GSVADNISFF DPDFDLERIE AAAKLAAIHE DIAAMPMGYH
ALIGDMGSAL SGGQKQRVIL ARALYRQPKL LFLDEATSHL DVMRERLVND AVHQLKLTKV
IVAHRPETIA STDRVVILDH GRIVQTVAMP EDRDDSIQIV HNTIQST
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