Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0474 |
Symbol | |
ID | 6119538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 530073 |
End bp | 531440 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641648544 |
Product | PmbA protein |
Protein accession | YP_001775114 |
Protein GI | 170729681 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.184246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACGTAT GTTCCACAGA TCTCAATAGT GTTGATGATA GCCAGGTGCG TTTGGATGTT CTGGCTGATA TTGCGCAGCG TTTGCTGGAG CGTGCTCATG CATGTGGTGC TACTCAGGCT GAAGTGGGTT GCAGTGAGGA GCGTGGGTTG GATGTGAATG TGCGTATGGG CGATGTGGAG ACGGTTGAGT CTACGTGTGA TCGCAGTATT GGGGTGACTC TGTATTTTGG TCAGCGTAAG GGCAGTGCTA GTACTGCTGA TTTGCAAGAG GCAAGTTTGG AGGCCACTGT TGCACAAGCG TGTGCGATTG CTCGTTATAC GGAGGATGAT CCAGCGAATG GGTTGGCTGA TCCAGTGCGA ATGGCAACGG TGTTCCCGGA TCTGGATTGT TGGCATCCGT GGACTCTGGA GGCCGGTACT GCGGTGGATT TGGCTCTGGG GTGTGAAGCA GCAGGCCGCG CTGCTGATGC CCGTATTGTC AATTCTGATG GTGCTTCGGT CAGTACTCGT TTTGCGTTGT CTGTGTATGC CAATTCGCAT GGTTTTGTCG GTCGTGAGCG TATGACTCAG CATTCGATGA GTTGTGCGTT GATCGCTGGT CAAGGGGATG GAATGCAGCG TGATGGTTGG TATACCAACG CTCTGGCACG AGAGGATTTG GAGTTGCCTG TTGCAGTTGG ACGTAAGGCT GCGGAGCGCA CTGTTGCGCG GTTGCAGCCG CGTTCTTTGG CGACGACTCA GTTACCAGTA TTGTTCGTTC CAGAAGTTGC ACGTTCGTTG ATTGGGCATT TGCTCAATGC GGTTTCCGGG GGGGCGTTGT ATCGTCGTGC TAGTTTTCTG CTTGATAGTG TTGGGACCCG GTTGTTCCCA GAGTGGTTTG CGATTAATGA GCGCCCCCAT TTGCGCCGTG GGCTTCGCTC GGCGACGTTC GATGCTGAAG GTGTGGCGAC TTGTGATGCT CCGTTGGTTG CAGGCGGGGT ATTGCAGCGT TATGTGTTGA GTAGTTATTC GGCACGCAAG CTTGGCTTGC AGAGTACTGC GAACGCAGGT GGTGTGCACA ATCTTGAGGT GATAGCGAAT GCTGCTGATC TGGATGCGCT TGTTGCTGGG TTACCGCGTG GTTTGCTGGT GACTGAATTA ATGGGCAGTG GTGTGAATCC GGTGACTGGT GATTATTCGC GTGGGGCGGC TGGTTTTTGG ATTGAGAATG GGGCGATTGC TTATCCGGTG GATGGTCTGA CTATTGCTGG CAATCTGCGT GAGATGTTTT CCGCCATTGA GGCGGTGGGT GCGGATGTGG ATCGGCGTTC GCATGTCAGC ATGGGGTCGT TGTTGATCGG GAGGATGATG GTGGCTGGTA ACGATTGA
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Protein sequence | MNVCSTDLNS VDDSQVRLDV LADIAQRLLE RAHACGATQA EVGCSEERGL DVNVRMGDVE TVESTCDRSI GVTLYFGQRK GSASTADLQE ASLEATVAQA CAIARYTEDD PANGLADPVR MATVFPDLDC WHPWTLEAGT AVDLALGCEA AGRAADARIV NSDGASVSTR FALSVYANSH GFVGRERMTQ HSMSCALIAG QGDGMQRDGW YTNALAREDL ELPVAVGRKA AERTVARLQP RSLATTQLPV LFVPEVARSL IGHLLNAVSG GALYRRASFL LDSVGTRLFP EWFAINERPH LRRGLRSATF DAEGVATCDA PLVAGGVLQR YVLSSYSARK LGLQSTANAG GVHNLEVIAN AADLDALVAG LPRGLLVTEL MGSGVNPVTG DYSRGAAGFW IENGAIAYPV DGLTIAGNLR EMFSAIEAVG ADVDRRSHVS MGSLLIGRMM VAGND
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