Gene Xfasm12_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0365 
Symbol 
ID6119572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp423501 
End bp424181 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content54% 
IMG OID641648436 
Producthypothetical protein 
Protein accessionYP_001775010 
Protein GI170729577 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGTAT CTATTCCTTC ACGCAATCGA CCAACCTGGC TTTGGGCGGT GCCATTGCTT 
TTTTTTGCTG TATTGATCGC GTTCCTTTGG TCGATCAGTA GGCCAGGCCA AGAACGCAGT 
ACGCTGTGGC TGGATTGGGG AGCACTGTCA GGTGGCTTTT CTCATGTGCC TGACATGTGG 
ATCACCTCGC AGGGTGGCAG TGCGCTGCGC CTGTTTACAG CACTGTTTCT CCATGCCGAT 
TGGGCTCATT TGTTGGGTAA TCTCGTGTTT CTGCTGATCT TTGGGTTACC AGCCGAACGT 
ATCCTCGGGT CGTGGCGGTT ACTGCTGCTG TTTCTGCTCG GCGGCGCACT GGCCAATTTG 
GCTGCGGTGT TGACCATCGG TAGCCCGAAT CACGTGATTA TTGGTGCTTC TGGTGCCGTT 
TCGGCGCTCA TTGGTAGTTA CCTGGCATTG TTTCCAGGAG CGAAGTTGGG AGTGGTGTTG 
CCGTTAGGGT TGTTTCTGGA GTTTATCCGG GTTCCAGCTC CTTTCCTCAT CGGGTTTTGG 
GCGTTGCTGC AGGTCGTATT TGCTTACACT GGCCCGACAT TGGTTATGGT TGCTTGGTCG 
GCCCATTTGG CAGGGTTTGT ATCTGGTGTT GTCTACGGAA GCTGTGTACG CGCTGCAATT 
GTGCGGCGGC TGCGTCAGTG A
 
Protein sequence
MFVSIPSRNR PTWLWAVPLL FFAVLIAFLW SISRPGQERS TLWLDWGALS GGFSHVPDMW 
ITSQGGSALR LFTALFLHAD WAHLLGNLVF LLIFGLPAER ILGSWRLLLL FLLGGALANL 
AAVLTIGSPN HVIIGASGAV SALIGSYLAL FPGAKLGVVL PLGLFLEFIR VPAPFLIGFW 
ALLQVVFAYT GPTLVMVAWS AHLAGFVSGV VYGSCVRAAI VRRLRQ