Gene XfasM23_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_2060 
Symbol 
ID6203408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp2312098 
End bp2313033 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content55% 
IMG OID641703570 
Producthypothetical protein 
Protein accessionYP_001830732 
Protein GI182682572 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.810367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACTC AGAGACAGCT GCCGCTACGT GCGGCAATGC TGATGCTATT CAGTACACTG 
TCGTTTGGCA TGATGGCAAT CACTATCCGT TACGCTTCCA CTCAAATACC CACGACAGAA
ATTGCATTCT TCCGCAATGC ATTCGGCCTG CTTGTCCTGC TCCCATTGAT ACTTGGCCCA
GGCAAGCCGC TACCACGTAC TCAACATGGG CCACGTTACA TAGCACGCTC AATGCTCGGG
CTGATATCAA TGCTGTGCAA CTTTTGGGCC ATTAGCCATC TGCCCCTCAC ACAAGCCATC
ACCCTGTCCT ACTCCACCCC GCTGTTTGCG ACCATTCTAG CCTCCCTACG GCTGCACGAG
GTCGTGCGGC TACGGCGCTT GCTAGCGATA CTAGCTGGCT TCGCTGGCAT CCTGGTGTTA
CTGCAGCCCT GGTCGAGCAC GTTCAGTCCA GCCCTACTGG TCGCGCTGGT CGCAGCGCTG
TTGAATGCGA TCATTACAAT CCAAATGAAG CAACTTTCGC ACCTTGATCC ACCAGATACC
GTCGTGTTCT ATACCTACGC GTTCTGGGTT CCATTATCGC TGCCACTCGC GCTGTGGCAG
TGGCACTGGC CGGAAGGAGT GGAGTGGGTA TGGCTCATCG CCACCGGCAT ATTCGGCACG
ATAGGGCAGC TCCTGTGGAT CCGCGCATTA CGCCTGGGAG AAGTCTCGAC ATTACAGCCA
ATTGGCTTCA TGCAACTACC GCTGGTGACA CTGCTCGGAT GGTGGTTATT CGGAGAACAT
TTGGATCGCT ACACCGCGTT AGGCGCATCC ATCATTATCG GCGCGAACGT CTACATCACC
CATCGAGAAG CAGTGCTGGC ACGACGCACG GCGACCGAAA CGATACAAAA AGGTGTCCAA
TCCAACGGAA TCAATCGCGC TCAGGGCCCG TCCTAG
 
Protein sequence
MVTQRQLPLR AAMLMLFSTL SFGMMAITIR YASTQIPTTE IAFFRNAFGL LVLLPLILGP 
GKPLPRTQHG PRYIARSMLG LISMLCNFWA ISHLPLTQAI TLSYSTPLFA TILASLRLHE
VVRLRRLLAI LAGFAGILVL LQPWSSTFSP ALLVALVAAL LNAIITIQMK QLSHLDPPDT
VVFYTYAFWV PLSLPLALWQ WHWPEGVEWV WLIATGIFGT IGQLLWIRAL RLGEVSTLQP
IGFMQLPLVT LLGWWLFGEH LDRYTALGAS IIIGANVYIT HREAVLARRT ATETIQKGVQ
SNGINRAQGP S