Gene XfasM23_1747 details

Gene Information

• Locus tag: XfasM23_1747
• ID: 6202955
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: -
• Start bp: 1933806
• End bp: 1937171
• Gene Length: 3366 bp
• Protein Length: 1121 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 641703257
• Product: exodeoxyribonuclease V, gamma subunit
• Protein accession: YP_001830425
• Protein GI: 182682265
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1330] Exonuclease V gamma subunit
• TIGRFAM ID: [TIGR01450] exodeoxyribonuclease V, gamma subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.632036
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCAGA TGATGGTCAC CACTGACTTT CGCCTATACC ACTCCAATGC ACTCGACGTT 
CTGGCGGGAT TGCTGGCCGA AACGTTGCGG TCCCCGGTGC CGGGCCAGTC GTTGTTGGTC 
CCAGACACAA TATTGATTCC ACAAGCGGCA ATGCGGCGTT GGTTGCAAGC CACGTTGGCC 
ACCACGCATG GTGTCGTGGC CAATCTGGAA TTTTTGACTC CGGGCGAGTT CGTTGCCCGT 
GCATTGGATG CCAATCTTGG TGCCGTGCCG AACGCTTTGG ATACGGCCGT GTTGCATTGG 
CGACTATATG CAGCGTTGCG CGATCCAGCA TTACTGACGC AACCAGAGCT TGCTGAATTA 
CATGCTTACC TGGCAGATGG CGACCTCTTC AAACCTTGGA CATTGGCCGA AGCACTGAGT 
GCAGCATTCG AAAAATACCA GGCTTGGCGT TGCGACTGGT TGCTACGCTG GGAGGCGGGC 
GCAGATCCGG ACGATCCACA GGCCATCCTA TGGCGGCATA GTGTTAACGG TGCCACGCAC 
CGCGCACGCC GCATCCACGA CTACCTGAAC CGTTATGGGT CAGGGACAGC CCCCCCCCCC 
CAAGGACTGC CAGCGCGACT CTTTATTTTC GCCACCCTCA ACATCTCCCC AGATGTATTA 
CGTGTCCTGG CGACCCAGGC ACAGGTTGGC ACACTGCACT TTTACCTGCC GACCCCGACC 
AAAGAATATT GGGGTGATGC GCAACCCTTC ACGCAACGCT TGCATCAGCC CACCGACTGC 
GTCACCCAGA CCGGAGAAAA CCGCCTACTC CATACCTGGG GTGCTGCCGG GCGTGATTTC 
ATGACTGTGT TGGGGAACTA CGAAGTCGTC CATCCCTCCG GCGAAATCAC CGCATACGAT 
GATCCGGAAC AACGTCCAGG CACCACCCTG GATGAAGGCG GCCTGCGCGA TAGCCTATTG 
CAGCGCCTGC ATGCGGATCT ATTCCATAAC CGTTCGGCAC CCGTCCCCGC CCCCTTGCCC 
GCACCGCGTC TGGAAGATCC CAGTCTCCAG TTTCACGCCT GTCATACCCG ACTACGTGAA 
CTCCAGGTCC TTCATGACCG GCTCCGTGCC TTGCTGGAAC CTAACTCACC GGAGGGACAG 
CGTTTTAACC CTCCCTTACA ACCGCGTGAG ATTGCCGTAT TGGCACCGGA CATCGACCTC 
TACATCCCCT ATCTAGAAGC CGTGTTCGGT GGACACGCCC ATAGCGACCC CTTGCCATAC 
ACACTGGCTG ATGCCAGCCC ACTGATTGAT GAACCGTTGG CTGAAGTCTT CTTGCGTCTC 
CTCGACTTGC CCGTATCCCG CTTTGGCCTG CACGAAATAT TGGACCTCCT GGCCAGCCTG 
CCGATGGCCA CCCTTGCTGG CTTTGACACA CAGACCTTGG AGATCCTGCG AAGCTGGCTG 
ACCGCCGCCG GCGCACGTTG GGGATTGGAT GCTGCCCACC GTGCCGAACA CCAAGCCCCA 
GCTGACGACG CCTACACCTG GAGCTTTGCA CTGGACCGCC TCCTCCTGGG TCACGCCAGC 
GGCGCAGATG CCGATATTGC TGGCGTCGCT GCTTGGCCGG ATCTGGAAGG CAGCATGCTG 
ACCGCATTAG ACACCCTGAT CCGATTACTG CGCGTCCTCG CCAATACACG ACAACGCCTG 
AGTGAGGCCC TATTACCGAC ACAGTGGCGA GAACGCCTAC TGAGCCTGCT TGATGCACTC 
CTGCCTGACA TCCCCACCGT ACCATCCGGT ATCCAGCGTC CCTTAGAACG CTTACGCAGA 
CTGATCGACA CCTTCGCCAC CGATGCCACA CGCGCCGGAG TGGCCTTACC CGTGCCAGCC 
GAAGTCGTGC GTATGCACTT TGCCGCTTTA CTAGCCGACA CCGATACCCG CGCCCCACTG 
CTCACAGGTG GCATCAGTAT TGGCCGCATG GTTCCCATGC GACTGCTCCC CTTCCGCGTC 
ATCTGTTTGT TAGGCATGAA CGACGGCGAC TTCCCGCGCC GCGATCCTGC GGCTGGCCTC 
AATCGCCTCA CCGCCGAACT TGGCACCGCG CAGCGTCGCC CTGGTGATCG CTCCCGACGT 
GATGACGACT GCCTCCTACT TCTACAGCTA TTCAGCGCCG CCCAAGACGT CTTCTACGTC 
AGCTACCTTG GCGTTGATCC ACACGACGGC AGCCTACGCG AACCCTCACC GCTGCTCACA 
GAACTACTTA GCACCGCAGC CACCTACCAT GCCGACCCCA GTACAGCGGC CAAAACACTG 
CTACTGCGGC ATTCATTACA GCCATTCTCC CCCACCGCCT TTGGCGCCGA CGGCGACCCA 
CGCCGATTCA GCTACCACCC CTTATGGCAG GCCGCCGCCG CGAGTATTGA AGGACAGCGC 
CACCCTCTGG CCCCCTGGTG TCCCCGCCGA CTCCCAGCCC TTCCCGACCC CGAACCCCCC 
CTACCACTGG ATAGCCTGCG GCGCTTCTTG AGCGCCCCTG CAGAACAGTT CCTACAACAG 
CGCCTGGGCC TACGCCTGCC CGAACCCCCT CAGACCACCG ATGAATGCGA CCCCCTCTGG 
CTTCCCAGCC ACGGCCTAGA ACGCCATCGA CTCGACACCC TGATATTTGC CTCCCTACTC 
CATGAGAATG ACGACACCCT CTACCCACAA CTACGCGCCC GCGCATTACT CCCCTCAGGT 
CCCTTAGGCC AACAGCAACT CCAAGAACGC ATTGAACACC TGCGCCCCTA TGCCCAAGCA 
TTTGCACATT GGCGCGGTAC CGCCCTCCCA CAGTCCCAGT GCCTTGAAGT AATGATCGAC 
GGCATCCGTC TCCACGCACA CATTCAGGAC CTCTACCCCC ACGGAATCGC CCGCCTGCGC 
CTGGGCCCCC CTAACGGCCC CGCAGTACTG CGCCACGGAT TAGATTGGCT GCTGGCCAGC 
GCCGCCGGCC ACCCCTGGCC CCTGGTCCGC TTTGAAGATG CAGGCGTTGC GGGCCTAGGT 
CCCCATCTAC AGCCATCCTT GCCCAGTTCC CAAGCACAGA CCGCACTGAC CCTACTACTC 
CGCCTGCGCA CGGCTGGCCT GCGCCAGCCC CTACCCTTTG CCCCCTACAG CGCCTGGGAG 
TACTACACCC AGCGCGACAC CCCCGAACGT GCCTTGCAGA CCGCCCGCGC CCGTTGGCGT 
GGTAACGACC ACCAATGGGG CGAAAGCAAC CATGCAGCGA TCCAATTAGC ACTGCGTAAC 
CACGATCCCT TTGCCACCCC GCAGACCGCT GCCCACTTTG CACAGCTCGC AACACTGATA 
TTTGACCTAC TCACCACCGG TCAGGCCGAC CCAGAACCCT TGACCTGGCT GCAACTGCAC 
CCATGA 

 

Protein sequence

MSQMMVTTDF RLYHSNALDV LAGLLAETLR SPVPGQSLLV PDTILIPQAA MRRWLQATLA 
TTHGVVANLE FLTPGEFVAR ALDANLGAVP NALDTAVLHW RLYAALRDPA LLTQPELAEL 
HAYLADGDLF KPWTLAEALS AAFEKYQAWR CDWLLRWEAG ADPDDPQAIL WRHSVNGATH 
RARRIHDYLN RYGSGTAPPP QGLPARLFIF ATLNISPDVL RVLATQAQVG TLHFYLPTPT 
KEYWGDAQPF TQRLHQPTDC VTQTGENRLL HTWGAAGRDF MTVLGNYEVV HPSGEITAYD 
DPEQRPGTTL DEGGLRDSLL QRLHADLFHN RSAPVPAPLP APRLEDPSLQ FHACHTRLRE 
LQVLHDRLRA LLEPNSPEGQ RFNPPLQPRE IAVLAPDIDL YIPYLEAVFG GHAHSDPLPY 
TLADASPLID EPLAEVFLRL LDLPVSRFGL HEILDLLASL PMATLAGFDT QTLEILRSWL 
TAAGARWGLD AAHRAEHQAP ADDAYTWSFA LDRLLLGHAS GADADIAGVA AWPDLEGSML 
TALDTLIRLL RVLANTRQRL SEALLPTQWR ERLLSLLDAL LPDIPTVPSG IQRPLERLRR 
LIDTFATDAT RAGVALPVPA EVVRMHFAAL LADTDTRAPL LTGGISIGRM VPMRLLPFRV 
ICLLGMNDGD FPRRDPAAGL NRLTAELGTA QRRPGDRSRR DDDCLLLLQL FSAAQDVFYV 
SYLGVDPHDG SLREPSPLLT ELLSTAATYH ADPSTAAKTL LLRHSLQPFS PTAFGADGDP 
RRFSYHPLWQ AAAASIEGQR HPLAPWCPRR LPALPDPEPP LPLDSLRRFL SAPAEQFLQQ 
RLGLRLPEPP QTTDECDPLW LPSHGLERHR LDTLIFASLL HENDDTLYPQ LRARALLPSG 
PLGQQQLQER IEHLRPYAQA FAHWRGTALP QSQCLEVMID GIRLHAHIQD LYPHGIARLR 
LGPPNGPAVL RHGLDWLLAS AAGHPWPLVR FEDAGVAGLG PHLQPSLPSS QAQTALTLLL 
RLRTAGLRQP LPFAPYSAWE YYTQRDTPER ALQTARARWR GNDHQWGESN HAAIQLALRN 
HDPFATPQTA AHFAQLATLI FDLLTTGQAD PEPLTWLQLH P