| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1640 |
|---|
| Symbol | |
|---|
| ID | 6202775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1819794 |
|---|
| End bp | 1820321 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641703152 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001830321 |
|---|
| Protein GI | 182682161 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3656] Predicted periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.807151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTA CCCTGACGAT TGCACTCAGC GGTCTGCTGT CCATGCCGAC CTACGCCACC
ACACTGAACA TCACCATCGA AATACCCACA CTCAGCGTTG CCGAATATCA CCGCCCCTAC
GTTGCAATCT GGATTGAAGA CGCCGATCAG AAAGTCGCAC ATAACTTGGC CATCTGGTAC
CAACAACGTA ACGGCGACAA AACACACGGC ACCAAATGGT TACCAGAACT GCGCCAGTGG
TGGCGCAAGA GCGGCCGTAC CGTAGAACTG CCTATAGACG GTGTCACCGG ACCCACTCGG
CCCGCTGGGC GGTACACCCT GTCCTTAGAA GAGCAAAAAC AACTCAAACA CCTACCACCA
GGAAAGTACA CCCTGGTTGT CGAAGCCACA CGTGAAGTCG GCGGGCGTGA ACTACTAAAG
ATTCCATTTA CCTGGCCAGT CACAACCATA CAGACGGGTC AAGCACTGGG TAAGAGTGAA
CTCGGCACCG TCACCTTGGC TGCCACCTCG AAACCCAAAC CTCATTGA
|
|---|
| Protein sequence | MRITLTIALS GLLSMPTYAT TLNITIEIPT LSVAEYHRPY VAIWIEDADQ KVAHNLAIWY
QQRNGDKTHG TKWLPELRQW WRKSGRTVEL PIDGVTGPTR PAGRYTLSLE EQKQLKHLPP
GKYTLVVEAT REVGGRELLK IPFTWPVTTI QTGQALGKSE LGTVTLAATS KPKPH
|
|---|
| |