Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1570 |
Symbol | |
ID | 6202661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1742752 |
End bp | 1744386 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641703081 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001830252 |
Protein GI | 182682092 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5434] Endopolygalacturonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTTG ACCGTTTCCT CCCCCTAGTG TTTGGACTGC ACTGTTTTGC CGCAATGGGC GGCACTGCTG ATGTCTTTCG AGTGTCACAG CTGTCCTCAT CAGATCTTTC CGAGCCGGTA TCGGTGAAAA CGCTATGGGG CGAGGTGCAA CGTCCCAGCC TACCTACCCA CGTGTGTACG GTATTGCCTG CGCGCCTGAC TCCTAAACAT GGCTCCATTG ACGCACTCGA TGCCAATCCA AAGGTTTCCA AGCCTGATAC CAAGCGTTTA CAGGATGCCA TTGATGATTG TCCCGCCGGT AGCGCGGTCA AACTAGTGAT CGACAGTCAT CGCAAATCCG GCTTTTTGAG TGGGCCGTTG CACTTGAAAT CTGGGGTGAC GTTGTGGATT GACGAGGGTG TTACGCTGTT TGCATCGCGC AACCCCAAGG ATTACGACAA AGGCAATGGT ACGTGCGGTA CTGCAACGTC AACTCATGAG TTCAGTTGTA TGCCTTTGAT CTCCGCGATC AACACCACCG GTAGCGGTAT CGTGGGTGGG GGTGTCATTG ATGGGCGTGG CGGTAGCATT TTGACTGGCG GTAAGTATGC TCGGCAGCGT ACCTGGTGGG ACCTGGCCTA TCAGAACAAG CGCCATGCAC TGCATCAACA GGTACCACGG TTGATCCAAA TCAGGGGCGG TAACGACTTC ACGTTGTACC GTGTTGCCAT CGAAAATGCA CCTAACTTCC ATGTGGTTGC TGATACGGTT AGCGGTGTCA CCGCATGGGG CATCCGCATC CTGACCCCAA GCTTGGTCTA TACCACGCCG GGGTACCACT GTCCGCCCGG TACCACGCCG GATGTTGTGA CGCCGGCGAC ATGCTTTACC CCGGACACGG TCAAGAACAC CGATGGCTTT GATCCTGGGC AATCAAACCA CGTGCTGCTA GCGTACTCCT ACATCAGCAC TGGGGATGAC CACGTTGCCA TCAAAGCGCG GGGCAAGATG CCAAGCTACG CTCTGAGCTT CTTACACAAC CACTTTGGCT ATGGACATGG CATGTCCATC GGTAGCGACA CCGAGTCAGG TGTACACGAT ATGGAAGTCA GTGATTTGAG TATCGACGGC TTTGACAGCC CTAACAGCAA TGGTTTGCAG ATGAAATCTG ATGCCGATCA TGGCGGAGTG GTCGACCATG TCACCTACTC CAAAATATGC ATGCGTCGTC TGAAACGTCC GCTGGCGTTT GACACCTTCT ACAAACCTTC CAACGGGAAT TCTTATCCAC TCTTCAAAAA TATCGTGCTG CAAGATATTC ATGTGCTTGA AAGTCCTGTC TTTGGTGCTG GTCAGCTGCT TTTCATGGGG ATCCTGGGCA GTGGGAATAA TCTGCCAATG ACGCTGAGCA TGGATAACGT CGTATTCGAC GGTTTTTTGC CAACATTGAT AGCGCCTCCC AGCAGTGTCG TATTCGCCAA TCCGCAGGCA GTGCATTTTC ACTTCGGTCC CGGTCCGGTC AGTTTCGCTC CTTTGATTAC CCCCTCGGTT GCTTACGATG TGACTGTGAG TGGAAGTCCA GGTGTGGGCA ACCCATACGA TTGTTCGGCG GCATTTATCA ATTTTTCCAG CGTATTTCCT GATTCGCCTA TCTAA
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Protein sequence | MNLDRFLPLV FGLHCFAAMG GTADVFRVSQ LSSSDLSEPV SVKTLWGEVQ RPSLPTHVCT VLPARLTPKH GSIDALDANP KVSKPDTKRL QDAIDDCPAG SAVKLVIDSH RKSGFLSGPL HLKSGVTLWI DEGVTLFASR NPKDYDKGNG TCGTATSTHE FSCMPLISAI NTTGSGIVGG GVIDGRGGSI LTGGKYARQR TWWDLAYQNK RHALHQQVPR LIQIRGGNDF TLYRVAIENA PNFHVVADTV SGVTAWGIRI LTPSLVYTTP GYHCPPGTTP DVVTPATCFT PDTVKNTDGF DPGQSNHVLL AYSYISTGDD HVAIKARGKM PSYALSFLHN HFGYGHGMSI GSDTESGVHD MEVSDLSIDG FDSPNSNGLQ MKSDADHGGV VDHVTYSKIC MRRLKRPLAF DTFYKPSNGN SYPLFKNIVL QDIHVLESPV FGAGQLLFMG ILGSGNNLPM TLSMDNVVFD GFLPTLIAPP SSVVFANPQA VHFHFGPGPV SFAPLITPSV AYDVTVSGSP GVGNPYDCSA AFINFSSVFP DSPI
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