| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1316 |
|---|
| Symbol | |
|---|
| ID | 6202155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1449306 |
|---|
| End bp | 1450559 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641702838 |
|---|
| Product | rare lipoprotein A |
|---|
| Protein accession | YP_001830011 |
|---|
| Protein GI | 182681851 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0797] Lipoproteins |
|---|
| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.250086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGC GCTGGTACTT CATAGCACTT GTATTTGACC TGATGGCGTG TAGCACCACA
CCACACAAAA GTGGCACATA CCCATCCCCA GCCACCTCCA AAATCACCGG CGGCAAACCA
ACACAGACCG CCAACATTTG CCCACCGACC TCCCCATACG CACCAGCTCA AGAGCTACCG
GGTACCCGCG ACGGCTACAC CAAAAATGGC CTGTATAAAC CTGGCATCAA AGATAGCATC
CCAGACAAAC TCCCCGATGT CTCCTGTATC CCTGAGCCCC TTGTGGCCAT CGAACCACGC
TCGGCTATCG GCAACCAATC CCCCTACGTG GTATTAGGCA AATCCTACCG GGTCCTTGAC
GAAGCCAAAG GCTATATCAA GCGCGGCGTT GCCTCTTATT ACGGAACAAA ATTCCATGGC
CGACTGACCT CCAACCGCGA AGTCTATGAC ATGTACGCAT TCACCGCCGC ACACAAGACA
CTACCACTCC CAAGCTTCGC CTTGATTACT AATTTGGACA ATGGCAAATC CGTCGTGGTC
AGAGTCAATG ATCGCGGCCC ATTTCACGAC GACCGATTGA TTGATCTCAG CTACGCTGCG
GCAGTGAAAT TAGGCTTTAC TGAAAACGGA CTCGCCAACG TCGAAGTGCG CGTACTCAGC
GAAGACGACA ACCCAATGCT CCTGGCCCGG CATGACAAAC GCATCGCACC GACAACAGCA
AATCCGGTGG CCACGACCAT GGCCCCAATG GCAACAACAC AACCACCAAC CACCAACATC
GCCGCCGCCG CTAAACCTGA TAACCCAATC AATCACCTGC AACCACTACC AACCAATGCC
CCCCTGATTG CTGCTCTTAC TCCGATAGGA TCTCCAACAA CCATCGCAAC GCGGCAACCT
AAATCTCCTA CCATTACAAC CACAAATGCC TCCGAAACCA CACCACCTAG TGAAACAACC
AAAGACACTC TTACACTTAC AGACTCCGCA CATACCTCCA AAGTCACAGC AACCACCACC
CTTGATAGCA TCCTAGTGCA AGTTGCCAGC TTCACAAGCC ACGAAAACGC CAGCCGTGCA
CTGACCCAAC TGACCTCAGC AGGCATTGTC GGCGCCAACC TCAGCGCGAT CGTCAACAGC
GGGCGGACCT TCTGGCGGCT GCGAATTAAC GCACCAAACC ATGACACCGC ATTGGAACTG
ATACGACGCA TTACCCATCT CGGGTTAGGC CGTCCAGAAA TCGTTGGCCT ATGA
|
|---|
| Protein sequence | MNTRWYFIAL VFDLMACSTT PHKSGTYPSP ATSKITGGKP TQTANICPPT SPYAPAQELP
GTRDGYTKNG LYKPGIKDSI PDKLPDVSCI PEPLVAIEPR SAIGNQSPYV VLGKSYRVLD
EAKGYIKRGV ASYYGTKFHG RLTSNREVYD MYAFTAAHKT LPLPSFALIT NLDNGKSVVV
RVNDRGPFHD DRLIDLSYAA AVKLGFTENG LANVEVRVLS EDDNPMLLAR HDKRIAPTTA
NPVATTMAPM ATTQPPTTNI AAAAKPDNPI NHLQPLPTNA PLIAALTPIG SPTTIATRQP
KSPTITTTNA SETTPPSETT KDTLTLTDSA HTSKVTATTT LDSILVQVAS FTSHENASRA
LTQLTSAGIV GANLSAIVNS GRTFWRLRIN APNHDTALEL IRRITHLGLG RPEIVGL
|
|---|
| |