Gene XfasM23_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_1287 
Symbol 
ID6202041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand+ 
Start bp1418571 
End bp1419203 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content51% 
IMG OID641702808 
Productribonuclease T 
Protein accessionYP_001829982 
Protein GI182681822 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAT CCATCACACC ACCTACACAC CCGCCAATGT CCCAACGCTT CCGCGGCTAT 
CTGCCTGTAG TGGTCGACGT TGAAACGGGA GGCTTTAACT GGAACCACCA CGCCCTGCTA 
GAGATCGCCT GTATCCCCAT TGAAATGGAC GATACTGGAA GGCTCTACCC CGGAGAAGTC 
ACCAGCACCC ATGTCATTCC AGCACCTGGT ACCGACATCG ATCCCAAATC ACTGGAAGTC 
ACTGGGATCA TACTCGACCA TCCGTTTCGC TTCGCCAAGG AAGAAAAGCT AGCGTTGGAA 
CATATATTCA CACCAGTGCG CACCACAATG AAGAAATACA AATGCCAGCG CGCAATCTTG 
GTAGGACACA ATGCGCATTT TGACCTCAAT TTCCTCAACG CAGCAGTAAC GCGAACCGCA 
TACAAACGAA ATCCATTTCA TCAATTCAGC GTATTTGACA CTGTCACTCT AGCAGGCATG 
GCCTACGGTC AAACCGTATT AGCACGTGCA GTACAAGCCG CCGGCTTGGA TTGGAACGCA 
GCTGACGCAC ACAGCGCAGT CTACGATGCT GAAAAAACAG CTCACCTATT CTGCACAATC 
ACCAACATAT GGCCATTAAT GGTTGCTGGA TGA
 
Protein sequence
MNQSITPPTH PPMSQRFRGY LPVVVDVETG GFNWNHHALL EIACIPIEMD DTGRLYPGEV 
TSTHVIPAPG TDIDPKSLEV TGIILDHPFR FAKEEKLALE HIFTPVRTTM KKYKCQRAIL 
VGHNAHFDLN FLNAAVTRTA YKRNPFHQFS VFDTVTLAGM AYGQTVLARA VQAAGLDWNA 
ADAHSAVYDA EKTAHLFCTI TNIWPLMVAG