Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0889 |
Symbol | glyS |
ID | 6203451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1051806 |
End bp | 1053974 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641702419 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_001829598 |
Protein GI | 182681438 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGAAC TAAAACCACT GCTGATCGAA CTTGGGACCG AGGAATTGCC GGTCAATGCT TTGCCGAACT TGTCGCGAGC ATTTTTCGAG GGGGTGCTGG CTGGGTTGGA GAGGCGCGGC ATTGTGGTCG ATCATGGTGA GGCCAAGTCT CTGTCGACTC CGCGTCGGCT TGCTGTGTTA CTCACGGCTG TGGCAGTGGA GCAGCCAAAG CAGTATCGCG AATTGTTTGG CCCTTATCTG AATACTGCGT TTGATACCGA AGGTAAGCCC ACGAAGGCGT TGGAGGGGTT TGCTGCTAAA TGTGGTGTCA ATTGGAGGAC ATTGGAGCGT ATTCGTGATA CCAAGGGCGA GCGTTTCGTA CATCGGGTGG TGGTGCCTGG CGAGCGTACG GATGCGTTGT TGCCAGGAAT ATTGACTGAA GCAATTGCGG GGATGCCTAT TCCCAAGCCG ATGCGCTGGG GCGCTCATGA ATATCTATTT GCACGTCCAG TCCATTGGTT GGTGATGCTT TTTGGGCAGG ATGTGGTTGA GGCTGAGATT ATGGGGGTGA AGGCTGGTCG TATCAGTCGT GGTCATCGCT TTTTGTATGA CAAGCCGGTG TCGCTGAGTG GTCCGCAGAA TTATATTGAT GTTCTTCAGG CTGCTTATGT GTTGGTGGAT CCTGCCGCAC GTCGTGCTCG CATTGTTGCT GAGATTGAGG CCGTAGCGCG TCAGGTTGGT GGAGTCGCGC GGATCACTGA AGATAATGTG GCGCAGGTGG TGAATTTGGT GGAATGGCCG TCGGCGGTGC TATGTAGCTT TGAGCGTGTG TTTCTTGAGG TGCCGCAGGA GGCGTTGATC CAAACAATGG AGGTGAATCA GAAATTTTTT CCTGTACTCG ATAGTTTGGG GAAGTTGACT GAGAAGTTCA TCGGTATTGC CAATATTGAG TCCAATGATG TTGCTGAGGT CGCAAAGGGC TATGAACGTG TGATCCGTCC GCGTTTTTCT GATGCTAAGT TTTTCTTCAA TGAGGATCTC AAGCAAGGTT TGAAAGCAAT GGGAGAGCGA CTAAGGACGG TCACCTATCA TGCGAAGTTA GGTACGCTGG CTGACAAGGT TGCGCGAGTT CTGGTACTGG CTGAAGCGAT TGCGCCACAG ATTGGGGTAG ATCCATTGCT TGCCAGGCGT GTTGCGTTGC TCAGTAAAAA CGACTTGCAA TCTCGCATGG TCAATGAGTT TCCGGAATTG CAGGGAGTTG CGGGTCATCA CTATGCCTTG ATTAGTGGTG AGTTACCCGA GGTCGCAATG GCGATTGAGG ATGCTTATCG GCCTCGCTTT TCTGGTGATG AGATCGCACG TTCGCCGTTG GGTAAGGTGC TCGGACTCGC CGAGCGTCTG GATACGCTGG CGTGTGGTTT TGCTGTGGGA ATGAAGCCAA CTGGTAACAA GGATCCTTTT GGGTTACGCC GCAATGCGTT GGGATTGGCA AGAACAATTA TTGAGAGTCG GTTCGATCTG GATTTAAAAG TGCTACTGGA TCAAGCGTCA GACTGGGTCG CGTTTGCGAC GACGATTGAG CAGGAGCGTC ATGCACAGGA ATCAGTGAAA CAGTCGAAAA AAGAAGCGGC TGTTAAGCAT TCGGTGCCCC AGGTCAGTGA TGAGAAATCT GCAAGAATTG AAGAGCTTTA CGATTTCATC GTAGAGCGTT TGCGTGGTTA CTATGCGGAT AAGGGCATTC CAACAACGCA CTTTAATGCA GTCGCTGAGC TTAAACCTGT CTCTTTATAC GATTTTCATC GCCGTCTTGA TGCAATCGGC AGATTTGCTG CTCTTCCAGA GGCAGAGGCG CTGGCAGTTG CCAACAAGCG TATCCGTAAT ATTTTGCGTA AGGCTGAAAT TAAGATTCCA GCATCAGTCG ATGCGACATT GTTCGATCAA CCAGCAGAGA GTGGGTTACT CGTGGCGTTG GAAGGTGTGA TCACCGATAC CCGCAGTGCA TTAGATTGCA AAAATTATGT CAGTGTCCTT ACATGTCTGG CACGGTTACG GCCACCCATT GATGAGTTCT TCGACAAGGT GATGGTTAAC GATGAAAATC TGATGCTGCG TGCTAACCGC TTAGCGTTAC TGCAACGCTT AGGGGAGTAT CTGTGTTGTG TTGCGGCCAT TGAACACTTG TCTAATTGA
|
Protein sequence | MTELKPLLIE LGTEELPVNA LPNLSRAFFE GVLAGLERRG IVVDHGEAKS LSTPRRLAVL LTAVAVEQPK QYRELFGPYL NTAFDTEGKP TKALEGFAAK CGVNWRTLER IRDTKGERFV HRVVVPGERT DALLPGILTE AIAGMPIPKP MRWGAHEYLF ARPVHWLVML FGQDVVEAEI MGVKAGRISR GHRFLYDKPV SLSGPQNYID VLQAAYVLVD PAARRARIVA EIEAVARQVG GVARITEDNV AQVVNLVEWP SAVLCSFERV FLEVPQEALI QTMEVNQKFF PVLDSLGKLT EKFIGIANIE SNDVAEVAKG YERVIRPRFS DAKFFFNEDL KQGLKAMGER LRTVTYHAKL GTLADKVARV LVLAEAIAPQ IGVDPLLARR VALLSKNDLQ SRMVNEFPEL QGVAGHHYAL ISGELPEVAM AIEDAYRPRF SGDEIARSPL GKVLGLAERL DTLACGFAVG MKPTGNKDPF GLRRNALGLA RTIIESRFDL DLKVLLDQAS DWVAFATTIE QERHAQESVK QSKKEAAVKH SVPQVSDEKS ARIEELYDFI VERLRGYYAD KGIPTTHFNA VAELKPVSLY DFHRRLDAIG RFAALPEAEA LAVANKRIRN ILRKAEIKIP ASVDATLFDQ PAESGLLVAL EGVITDTRSA LDCKNYVSVL TCLARLRPPI DEFFDKVMVN DENLMLRANR LALLQRLGEY LCCVAAIEHL SN
|
| |