Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0050 |
Symbol | |
ID | 6202196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 76217 |
End bp | 77281 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641701580 |
Product | fimbrial protein |
Protein accession | YP_001828782 |
Protein GI | 182680622 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATAG TCAACACGAT TAGTGTCGCG CACATCTCTA CATACCAGCA ACGGACTTTA AAAATAATAG CAGCGTGCCT AACGATGCTA ATCGCACCTC ACGTTCAGGC AACTTGCACC ATCAAGGAAG GCATAGTCGC GCAAAACATC GACTTTGGTG CAGGCCGCAT TCTGATCCAA CCCTCACTGG CTATCGGTGA TCGTATTGCT CTGTTAACCC ATAATATTAA TCGCGTCGAC AGATATGGAA CATGTGTCAA TAACGGGATC ATGTACGGCG CTTTCACTCG TTCAATGACC CCCGTCAGCG GCATGAAGAA TGTTTATGCG ACCGATGTTG CAGGCGTAGG AATCAGACTC TACCGGGAAG CGGGCAAAGT ATCCAATTTC TACCCTCACA CATTGAATTC TAATAATCCC CCCGGTAGAG TCACTAATCT CAGCCTCAAC GAAGGATATT TCCAAGTTGA ACTGATCAAG ACCGCCACCA CCACCGGCTC AGGGCCAATT GCAAGCGCTG GGCCATTCAC TACTTACTAT GCGGATGGCA GTGGCATCAG TCGCCCGATA CTAACATCCT CACTCAGTGG GATCGGTATT ACCATTGTTA CCTCAACATG TCAGGTCGAT GCTGGATCAA AGAACATCGC TGTCAATTTC GGCTCGGTAT CCAGTAACAC CTTTAAAGGA CTCGGCTCCA AAGGGCCCGA GCGTGACTTT ACTATCAATT TGATATGCCA TGGAGGCAAT GTGACCGAAG CCGATCAGGC ACAAATATCT GTGCGTATTG ATGGCACACA GGATAGCTCC GGGCAATCTG GGGTACTTGC CATCACTTCA GCCAGCGACG CAGCCAGCAA TATAGGCATT GAATTAGTAG ACCTCCTAAC TGGAAGTGAA CGTCAGGTGG TGTTTGGGCA AGCTATCACA CTAGGCCGGA CCGCTATCAA CGCTAGCAGT ACATTGAGCC TGCCAATGCG GGCCAGATAT ATCCAAACGC AAACAGGAAA AGTAGGCCCA GGTGCAGCAA AAGGAACGGC AACCTTCACG ATTGAATACC AGTAA
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Protein sequence | MSIVNTISVA HISTYQQRTL KIIAACLTML IAPHVQATCT IKEGIVAQNI DFGAGRILIQ PSLAIGDRIA LLTHNINRVD RYGTCVNNGI MYGAFTRSMT PVSGMKNVYA TDVAGVGIRL YREAGKVSNF YPHTLNSNNP PGRVTNLSLN EGYFQVELIK TATTTGSGPI ASAGPFTTYY ADGSGISRPI LTSSLSGIGI TIVTSTCQVD AGSKNIAVNF GSVSSNTFKG LGSKGPERDF TINLICHGGN VTEADQAQIS VRIDGTQDSS GQSGVLAITS ASDAASNIGI ELVDLLTGSE RQVVFGQAIT LGRTAINASS TLSLPMRARY IQTQTGKVGP GAAKGTATFT IEYQ
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