Gene Xcel_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_3340 
Symbol 
ID8650896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand- 
Start bp3699054 
End bp3699737 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003327898 
Protein GI269958109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCAC CCCGACGCCG GGCCTCGCAC TCGATGGAGA CGGTGATCGC CGAGGCCGTC 
GCCCTCCTGG ACGAGGCGGG TGAGCCGGCC CTGACGTTCC GAGCACTGGC CGCACGGCTG 
GGCGGAGGGG TGGCGAGCAT CTACTGGTAC GTCGCCAGCA AGGACGAGCT GCTCGACAAG 
GCGACGGACC ACGTCCTCAC CGGCCCGCTC GCGGACATCG AGCGGTTCCT GGACGGCGAC 
GACCCGATCG ACAACCTCCG GGCCATCGCC GTCACCGTCT TCGACGTCAT CGTCCAGCGG 
CCTTGGCTCG GCGCCTACTT CATGCGCAAC ACCGGGACCC AGCCCAACGC GCTCCTCCTC 
TACGAGCGGA TCGGCGAGCA GGTGCTGCGG CTCGGCCTCA CGCGGCGGCA GGCCTTCCAC 
GCGGTCTCCG CCATCGTGGG CTTCGTCGTC GGCACCGCGG CTGACCTGGG GCAGCAGCCA 
CCACAGGAGG TGCTCGACGG CGAGGTCACC CGCGACGACT ACCTCGCCGA GATCGTGACC 
GAGTGGCGCG CCCTGGACCC CGAGGCGTTC CCCTTCGTCC ACCACGTCGT CGACGAGTTC 
GCCGTGCACG ACGACGCCGA GCAGTTCCGG GCAGGCCTCG ACCTGCTGCT CGCCGGGCTG 
CGCCTCCAGG CCACGGGCAC CTAG
 
Protein sequence
MPAPRRRASH SMETVIAEAV ALLDEAGEPA LTFRALAARL GGGVASIYWY VASKDELLDK 
ATDHVLTGPL ADIERFLDGD DPIDNLRAIA VTVFDVIVQR PWLGAYFMRN TGTQPNALLL 
YERIGEQVLR LGLTRRQAFH AVSAIVGFVV GTAADLGQQP PQEVLDGEVT RDDYLAEIVT 
EWRALDPEAF PFVHHVVDEF AVHDDAEQFR AGLDLLLAGL RLQATGT