| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3237 |
|---|
| Symbol | |
|---|
| ID | 8650793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3587844 |
|---|
| End bp | 3589238 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003327795 |
|---|
| Protein GI | 269958006 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCA CACCCAGGAA CGCCGGCCGA CGGCGGGTTC TCGCGTTCGG CGCGGGGGTC
GCCTCGCTCG CGCTGGTCCT CGCCGCCTGT TCGAGCGACG GCGACGGCGG TGACGACGGC
GACGGCGACG GCAACGGCGC CGCCGAGTCC AGCATCGACT GCTCCGTCTT CGAGGAGTTC
GGAGACCTCA GCGGCACCAC CGTCAGTGTC TACACCTCGA TCGTGGACCC CGAGTCGCAG
TCGCACATCG ACTCGTACGT GCCGTTCACC GAGTGCACGG GCGTCGAGAT CAGCTACGAG
GGCTCGCGCG AGTTCGAGGC CCAGCTCCCC GTGCGCGTCC AGGCGGGCAA CCCGCCGGAC
ATCGCCATCG TGAACCAGCC CGGCAACCTG CGGACGCTCG TGCGCCAGTT CGACGCCGTC
GTCCCCGCCC CCGCATCCGT CGACGCGCTG GTCGACGAGA ACTTCTCGGA GTCGTGGAAG
ACGTACGGCA CCGTCGACGG CACGTTCTAC GCCGCCCCCT ACGACGCCAA CGTGAAGTCG
TTCGTCTGGT ACTCGCCGAC GGCCTTCGCC GACGCCGGCT ACGAGATCCC GACGACGTGG
GACGACTTGC TCGAGCTCAC CGACACGATC GCGGCCGACA CGGGCCTGCC GCCCTGGTGC
GCCGGCGTCG AGTCGGGTGA CGCGACCGGC TGGCCGGGCA CCGACTTCAT CGAAGACATG
GTGCTGCGCA CCGCGGGCAT CGACGTCTAC AACCAGTGGA CGGAGCACGA GATCCCGTTC
AACGACCCGC AGATCGTCGA GGCGTGGGAC GAGGCCGCCA AGATCCTCAA GGACGACGCC
AACGTCAACG CGGGCCTCGG CGACGTCCGG TCGATCGCGA CCACGCCGTG GTCCAGCGCC
GGGTTCGGCA TCCTGGACGG CACGTGCTGG CTGCACCGCG CGGCGAACTT CTACGCGGCC
CAGTGGCCCG AGGGCACGAC GGTCGCCGAG GACGGCGACG TCTGGGCCTT CTACCTGCCG
GCCATGGCGG AGGACGAGCG CCCGACCCTG GTGGCCGGCC CGTTCATCGC CGCGTTCAAC
GACCGGCCCG AGGTGCAGGC CTTCCAGACG TACCTCGCGA GCACCGACTG GTCGAACGAG
AAGGCGAAGG TCAGCCCCGC GGGCTGGGTC AGCGCCAACA TCCACCTCGA CCCGTCCCTG
CTCGACACGG ACTTCGACCG GTACACCTAC GACGTCCTGA CCGACCCGGC GACGGTCGCG
GGCTACGACG CCTCCGACCA GATGCCGTCC GAGGTCGGCG CCGGCACGTT CTGGTCCGGC
ATCGTCAACT GGCTCACCGG CCAGACGACG CAGCAGGTCG TCGACTCCAT CGAGAACAGC
TGGCCGAGCG ACTGA
|
|---|
| Protein sequence | MTRTPRNAGR RRVLAFGAGV ASLALVLAAC SSDGDGGDDG DGDGNGAAES SIDCSVFEEF
GDLSGTTVSV YTSIVDPESQ SHIDSYVPFT ECTGVEISYE GSREFEAQLP VRVQAGNPPD
IAIVNQPGNL RTLVRQFDAV VPAPASVDAL VDENFSESWK TYGTVDGTFY AAPYDANVKS
FVWYSPTAFA DAGYEIPTTW DDLLELTDTI AADTGLPPWC AGVESGDATG WPGTDFIEDM
VLRTAGIDVY NQWTEHEIPF NDPQIVEAWD EAAKILKDDA NVNAGLGDVR SIATTPWSSA
GFGILDGTCW LHRAANFYAA QWPEGTTVAE DGDVWAFYLP AMAEDERPTL VAGPFIAAFN
DRPEVQAFQT YLASTDWSNE KAKVSPAGWV SANIHLDPSL LDTDFDRYTY DVLTDPATVA
GYDASDQMPS EVGAGTFWSG IVNWLTGQTT QQVVDSIENS WPSD
|
|---|
| |