| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2343 |
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| Symbol | |
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| ID | 8649879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylanimonas cellulosilytica DSM 15894 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013530 |
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| Strand | + |
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| Start bp | 2545027 |
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| End bp | 2546805 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | Type IV secretory pathway VirD4 protein-like protein |
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| Protein accession | YP_003326917 |
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| Protein GI | 269957128 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.970374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACC CGACCACTGC ACGCGCAGGG AACGACACGC TGACGAACGT CGCCCTCGGT
GCGCTCGTCG CTGGCCTCGC TCTCGCCGGA CTGCTCCGGG CCGCGGCGAT CCTGGCGACC
CACCTGACGG GGCGGCCGTC CCCGGAAGGG AACCTTGTCG CAGGTTTCCG CGTCCTCGCG
GACCCGTCGG GCCCCGCAGT CGTCTTCGAC TCGCCCGGCC TGACCGCCGT CGCCTATTGG
TCCGTTCTCG CCGTCCTGGT GCTCGCCTCC GGGAGCGTCG CCGTCGTCGG GTGGCGGGTG
TTCCGGCCGG GGGCGGTCCG GTCGGACGGG TTCGCTACCC GGGCCGACGT CGCCAAGCAC
GCCTCCGCGC GAGCCCTGCG GAAGCGATCC AAGTACCTGC GGCCGTCCCT CGGCCGACGC
CGTCGACCGG AGGACGTCGG CTACCTCCTC GGCCGCTACC AGGGCCGAGA GCTGTGGGCC
TCGGTCGAGG ACTCGTTCCT CGTCATCGGC CCCCCGCGCA TGGGCAAGGG CGAGCACATC
GTCATCAACG CGATCCTCGA CGCACCCGGC GCCGTCGTGA CCACGTCGAC CCGACCCGAC
ACCCTCGCCG TCACCCTCAG AGCGCGCGAA CGCCGGGGAC CTGTCGCCGT CTTCGACCCG
CAACGCCTCG CACCCGGCCT GACCACCGGC CTGCGCTGGT CACCGATCCG CGGCTGCGAG
GACGAAGAGG TGGCGTCGCT GCGGGCTCGC GGTCTCGCGT CGACGACCGG GTTCGGTGGG
CACGACACCG ACAACAGCGG CTACTGGCAG GGCCTGACCC GCAATGTCCT CGAGTGCCTC
CTGCACGCCG CAGCGCTCGG CGCCCGCTCC CCCGCCGACC TCTACCTGTG GTCCAAGACC
CCGGCCGCCG CGCAGGAAGC GGTCGCGATC CTGGCGGCCC ACCCCGACGC GGCACCGCGC
TGGGCCGAGA CCCTCAACGC GCAGGTCAAC GCCGACCCCC GCACCCGCGA CTCCGTGTGG
GGAGGCGTCT CCCTCGCCCT CGGATCGCTC AACACCCGCA CCGTCATGGA CGCCGTCAGC
CCCGGACCCG GCGAACACTT CGACCCCGAA GCATTCCTGC GTGCAGGCGG CACCCTCTAC
CTACTCGCGA CCAGCGCGGG CTCGGGCGGC GTCGCACCCC TGGTCGGGGC GTTCATCGAG
GACATCACCG AGACCGCCAA GCGCCTCGCG GCCCGCTCCC CGATGCAGCG CCTCGACCCG
CCGCTGCTCC TCGCGCTCGA CGAGATCGGC AACCTCGCAC CCCTGCCCAC CCTCCCGGCG
TTGATGTCCG ACGGCGGCGG CTCGAACATC ACCGTCATGC CCGTCCTCCA GTCCTGGGCA
CAAGCCCGCA ACGCCTGGGG CACCGAGAAA GCAGGAGCCA TCTGGGAAGC CGCCATCGTC
AAGATCAACC TCGGCGGCTC CGCCGTCGCC CGCGATCTCC AAGACGTCTC CGCCCTCCTC
GGCGAACGAG ACGACACCAC CTACTCCACG TCGATCGGAG CCGACGGCTC CAAGTCCACC
TCAGCGTCTG TCCGACGGGT ACCCGTCATG TCACCGCAGC AACTGCGCGC CATACCCCGG
GGCAAGGCCC TCATCCTGCT GCGCTCAGTC GCGCCGATGA TCGCCGACCT GCGTCCGTGG
CGGTCTCGGA AGGACCGCAA GCAGCTCCTC GCGGACCAGC AGGACGTCGA GGCCAGGCTC
GCGCGCGGCG CGGTCCTCGA CCGAGTGGTG TCCCCGTGA
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| Protein sequence | MNNPTTARAG NDTLTNVALG ALVAGLALAG LLRAAAILAT HLTGRPSPEG NLVAGFRVLA
DPSGPAVVFD SPGLTAVAYW SVLAVLVLAS GSVAVVGWRV FRPGAVRSDG FATRADVAKH
ASARALRKRS KYLRPSLGRR RRPEDVGYLL GRYQGRELWA SVEDSFLVIG PPRMGKGEHI
VINAILDAPG AVVTTSTRPD TLAVTLRARE RRGPVAVFDP QRLAPGLTTG LRWSPIRGCE
DEEVASLRAR GLASTTGFGG HDTDNSGYWQ GLTRNVLECL LHAAALGARS PADLYLWSKT
PAAAQEAVAI LAAHPDAAPR WAETLNAQVN ADPRTRDSVW GGVSLALGSL NTRTVMDAVS
PGPGEHFDPE AFLRAGGTLY LLATSAGSGG VAPLVGAFIE DITETAKRLA ARSPMQRLDP
PLLLALDEIG NLAPLPTLPA LMSDGGGSNI TVMPVLQSWA QARNAWGTEK AGAIWEAAIV
KINLGGSAVA RDLQDVSALL GERDDTTYST SIGADGSKST SASVRRVPVM SPQQLRAIPR
GKALILLRSV APMIADLRPW RSRKDRKQLL ADQQDVEARL ARGAVLDRVV SP
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