| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2239 |
|---|
| Symbol | |
|---|
| ID | 8649773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 2417615 |
|---|
| End bp | 2418916 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003326815 |
|---|
| Protein GI | 269957026 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0181769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCA CGACCGCCCG ATCGGGCGCC CTCGCGTTCT GGGACGAGCT GCCCCGCGAC
GGGCGGTGGC TGCTGTCCAC CGTCGTCGTG CAGTTCTTCG GGCGCGGCCT GACGCTGCCG
TTCACGATCA TCTACCTGCA CGAGGTGCGC GGGTTCCCGC TCGGCCTGTC GGGCACGCTC
ATGGGCCTGA TCGCGATCAC GGGACTGGTG ATCACCGGGC CCGCGGGCGT GCTCGTGGAC
CGGCTCGGCG CACGGGTCGT GGTGGTCGGC GGGCTGCTCG CCGCGATGGC GGGCCTCGGC
CTGCTGGCCT TCGCCACCGT GCCCTGGGTC GCGGCGGTGG CGCTCTGCCT GTTCGGGATC
CAGCTCGGGG TGGCCTGGCC GGCGATCAAC GCCCTGGTGG CCACCGTGGT CACGGGCGAC
CTGCGCCAGC GCTACTACGG CGTCAGCTTC GCGCTGCTCA ACCTGGGGAT CGGTGTGGGC
GGCGTCGTCG GCGGCCTGCT GATGGACGTC GACCGTCCGG CCACGTTCGT CGTCGCGTTC
ACCGTCAACG CGGCCTGCTT CGTCCCGGCC CTGGTGGTGC AGCTCGGTCC CCTGCGGCAC
CTGCACGGCC GCGCCGCACG TCCCGGGCCC GACGACGTCG CCGCCCCGTC CGTCGGCTAC
CTCGCGATCC TGCGCACGCC GGCCGTCGCG TGGCTCACCG TGCTCGCGCT GCTGGCCTCG
TTCGTGGGCT ACGGGCAGAT GGAGGCCGGG TTTCCCGCCT TCGCCCGGCA GGCCTCGCAG
GTGTCCACGC GGGTGGTGGG CTTCGCGTTC GTGGTCAACA CCGTGGTGAT CGTGGCCCTG
CAGTTCTGGG TGATGGGCAG GGCGCGCGGG CGGCGGCGCA CCCGCGTGCT CGCGGTGATG
GCCCTGGTGT GGGCGGTGGC GTGGCTGACC CTGGGGGCGA CCGGGCTGGC GCCGGGGACG
GTCCTCGCCG TCGTCGGCGT GCTGGCGTTC CACGCCCTGT TCGGATTCGG GGAGACGATG
CTGCAGTCCA CGATGCCGGC CGTCCTCAAC GACCTCGCCC CCGACCACCT GCGCGGCCGG
TACAACGCCA TGCAGTCGGC GGCGTTCCAG GTCGGGTCGA TCGTCGGGCC GATCGCGGCC
GGGTTCCTGC TCGAGCACCA CCTCTCGGCC GTGTTCATCG CCGTGGTGGT GGCGGGGTGC
GTCGCGATGC TGGCCGTGCT CGCCGTCCTG GAACGGACGA TCCACCCGGA GGCCAACGGG
GTCGCTGCCC CGTCGCCGGC GCCATCCCCG GAGACGGCGT AG
|
|---|
| Protein sequence | MPATTARSGA LAFWDELPRD GRWLLSTVVV QFFGRGLTLP FTIIYLHEVR GFPLGLSGTL
MGLIAITGLV ITGPAGVLVD RLGARVVVVG GLLAAMAGLG LLAFATVPWV AAVALCLFGI
QLGVAWPAIN ALVATVVTGD LRQRYYGVSF ALLNLGIGVG GVVGGLLMDV DRPATFVVAF
TVNAACFVPA LVVQLGPLRH LHGRAARPGP DDVAAPSVGY LAILRTPAVA WLTVLALLAS
FVGYGQMEAG FPAFARQASQ VSTRVVGFAF VVNTVVIVAL QFWVMGRARG RRRTRVLAVM
ALVWAVAWLT LGATGLAPGT VLAVVGVLAF HALFGFGETM LQSTMPAVLN DLAPDHLRGR
YNAMQSAAFQ VGSIVGPIAA GFLLEHHLSA VFIAVVVAGC VAMLAVLAVL ERTIHPEANG
VAAPSPAPSP ETA
|
|---|
| |