Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_2118 |
Symbol | |
ID | 8649649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 2274528 |
End bp | 2276693 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | glycoside hydrolase clan GH-D |
Protein accession | YP_003326694 |
Protein GI | 269956905 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.691488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACGACGG GGACCGACGG CGTCGTGCAC CTGCGCGCGG GGGGAGTCTC GCTCGTCGTC GAGACGGGCG GTGGGCTGCC GCGGATCGTG CACTGGGGTG AGGACCTCGG TGACCTCGAT CCGTCCAGCG TGCGGGCCGT CGCGACGTCG TCGGTCCCAC CCGTGGTCTC GGGCCCGGTG GACGAGGTCG TCCCGCTCGC GGTGCTGCCC GAGGCGCACC GCGGGTGGCT GGGCACTCCT GGCCTCTCCG GGCACCGCCG CGGCCGGCAC TTCGCGCCGG CCTTCGTCAC CGCCGCCGTC GAGGCACAGA CGTCCGACGG CGGTGCGCAG CGGCTGGTCA CGCATGCACG TGACGATGAC GCGGCACTCT CCCTCACGGT GACGATCGAG CTCGCGCCGT CCGGCCTCGT GTCGCTCGAC GCAGCCCTCA CCAACGACCA CCCGACGGAG CCGTACCAGC TGGACGCCCT GCTGCTCGCG CTCCCCGTGC CCACGCTCGC GACGGAGATC GTGGACTTCA CGGGACGCCA CCTGCGGGAA CGGTCGCCGC AGCGGCACCG GTTCACCCAG GGCACCCATC TGCGGGAGAA CCGCCGGGGT CGGACCGGTG CCGACGCGAC GACGCTGCTC CTCGCCGGCA CGCCGTCCTT CTCGTTCGAG TCCGGCGAGG TGTGGGGCGT CCACGTCGCG TGGAGCGGCA ACCATCGCAC GCTGGCCGAG CGGAGCGCCG AGGGGCAGGG AGTCCTGGCC GGCGGGGAGC TGCTGCTCCC CGGCGAGCTG GAGCTCGCCC CCGGCGAGAC GTACACGTCC CCGACCGTGT ACGGCGCCTG GGGGCGTGGC CTCAACGCGC TCTCGTGGCG GTTCCACGAG TACCTGCGCG CGCGCCCGGG CCACCCGAGC GCGCGCCGCC CGGTACTCCT CAACACGTGG GAGGCCGTCT ACTTCCACCA GGACGTCGAC GCTCTCACGC AGCTCGCGGA CGTCGCCGCC GACGTCGGCA TCGAGCGGTT CGTGCTCGAC GACGGCTGGT TCCGGGGCCG GCGCGACGAC ACCGCGGGCC TGGGCGACTG GTACGTCGAC ACCGACGTGT GGCCGCAGGG CCTCCACCCG CTCGTCGAGC GCGTGCGGGA GCGCGGGATG CAGTTCGGGC TGTGGTTCGA GCCCGAGATG GTCAACCCCG ACTCGGACCT CGCCCGCGCG CACCCCGAGT GGATCCTCGG CCCCGGCCCG AGCCTGCCGC CCGAGGCGCG TCACCAGCAG GTGCTCGACC TGGCCGACCC GGACGCCTTC GCGTACGTGC TCGGCCGGCT CGACGCCGTC ATCAGCGAGT ACGACGTCGA CTTCGTCAAG TGGGACCACA ACCGCGACCT CGTCGCGCCC GGGCGCGGCC CACGCCGCAC GGCCGGGACC CACGAGCAGA CGCTCGCCGT CTACCGCCTG GTCGACACGC TGCGCGAGCG CCACCCACGG CTCGAGATCG AGTCGTGCTC GTCGGGCGGC GCGCGCGTCG ACCTCGGCAT CCTCCAGCGC ACGGACCGCG TCTGGGCCAG CGACTCGATC GACGCGCTCG AGCGCCAGCA CATCGAACGC TGGACGCGTC TGCTGCTGCC GCCCGAGCTC GTCGGTTCGC ACATCGGGTC GGCGTGGGCG GCCGCGACCG GCCGCACCCA CGAGCTCGAG ATGCGGGCGG GCACGGCGTT CTTCGGCAGC CTCGGCATCG AGCGCGACCT GCGTCACGCC GACGCCGAGG AGCGTGCCGC GCTCCAGGCC TGGATCGCCC TGTACCAGCA GCACCAGGAG CTGCTCCACA CCGGGCGCTT CCACACCGTG GACCACGGCG ACCCGTCGCT GCACGTCCAC GGCGTCGTCG CGCAGGACCA GGCCGAGGCG ATCTACTCCT TCGTCGCGGT GGCGACGTCC GAGTACGCGC GGCCGGGCCT GGTGCGGCTG CCCGGCCTCG ACCCGGACGT CAGCTACGAC GTACGGCCCG TGCCGCTCGC CGCGCGCGTC GAGAAGTTCA TGGGGTTCAC CGCTCCCCCC TGGTGGGCTG ACGGGATCAC CCTTCCCGGC AGCGTCCTGT CCCGGCACGG GGTGCAGATC CCCGCGCTCT TTCCCGAGAG GTTGACGATG GTGCATGTGC AGCGGGCGAC GGCGGTCGCG CGATGA
|
Protein sequence | MTTGTDGVVH LRAGGVSLVV ETGGGLPRIV HWGEDLGDLD PSSVRAVATS SVPPVVSGPV DEVVPLAVLP EAHRGWLGTP GLSGHRRGRH FAPAFVTAAV EAQTSDGGAQ RLVTHARDDD AALSLTVTIE LAPSGLVSLD AALTNDHPTE PYQLDALLLA LPVPTLATEI VDFTGRHLRE RSPQRHRFTQ GTHLRENRRG RTGADATTLL LAGTPSFSFE SGEVWGVHVA WSGNHRTLAE RSAEGQGVLA GGELLLPGEL ELAPGETYTS PTVYGAWGRG LNALSWRFHE YLRARPGHPS ARRPVLLNTW EAVYFHQDVD ALTQLADVAA DVGIERFVLD DGWFRGRRDD TAGLGDWYVD TDVWPQGLHP LVERVRERGM QFGLWFEPEM VNPDSDLARA HPEWILGPGP SLPPEARHQQ VLDLADPDAF AYVLGRLDAV ISEYDVDFVK WDHNRDLVAP GRGPRRTAGT HEQTLAVYRL VDTLRERHPR LEIESCSSGG ARVDLGILQR TDRVWASDSI DALERQHIER WTRLLLPPEL VGSHIGSAWA AATGRTHELE MRAGTAFFGS LGIERDLRHA DAEERAALQA WIALYQQHQE LLHTGRFHTV DHGDPSLHVH GVVAQDQAEA IYSFVAVATS EYARPGLVRL PGLDPDVSYD VRPVPLAARV EKFMGFTAPP WWADGITLPG SVLSRHGVQI PALFPERLTM VHVQRATAVA R
|
| |