Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0886 |
Symbol | |
ID | 8648396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 951757 |
End bp | 952923 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | L-rhamnose isomerase |
Protein accession | YP_003325476 |
Protein GI | 269955687 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTCCT TCGACCGGAT CGTCCCGGTG CTCGACCGGC TCGCGATCGA GGTGCCGTCC TGGGCGTACG GCAACTCCGG CACCCGCTTC AAGGTGTTCG CCACGCCGGG CACCCCGCGC ACGCCGCAGG AGAAGATCGC GGACGCCGCG AAGGTCCACG AGCTGACCGG GCTCGCCCCG ACCGTCGCGC TGCACATCCC CTGGGACAAG GTGGACGACT ACGCCGCGCT GCGCTCCTTC GCCCAGGACC ACGGCGTCGA CCTCGGCACC ATCAACTCGA ACACGTTCCA GGACGACGTC TACAAGCTCG GCTCGCTGAC CCACCGCGAC CCCGCGGTGC GCCGTCGGGC GATCGACCAC CACCTCGAGT GCATCGAGAT CATGGGCCGG ACCGGGTCGC GCGACCTGAA GATCTGGCTC GCCGACGGCA CCAACTACCC CGGCCAGGGC GACATCCGGG CACGGCAGGA CTGGCTGCAC GAGTCGCTGA CGGAGATCTA CGCCCACCTG GGCGACGAGC AGCGCATGGT GCTCGAGTAC AAGTTCTTCG AGCCGGCGTT CTACCACACG GACGTGCCCG ACTGGGGCAC CTCGTACGCG CACGTCAACG CGCTGGGGGA CAAGGCGTTC GTGTGCCTCG ACACGGGCCA CCACGCCCCG GGCACCAACA TCGAGTTCAT CGTCGCGCAG CTGCTGCGCC TGGGAAAGCT CGGCTCGTTC GACTTCAACT CCCGGTTCTA CGCCGACGAC GACCTGATCG TCGGGGCGGC CGACCCGTTC CAGCTCTTCC GGATCCTGGC CGAGGTGGCG CGCGGCGGCG GCCTCGACGA GGGGTCGCCC GTCGCGCTGA TGCTGGACCA GTGCCACAAC ATCGAGGACA AGATCCCCGG CCAGATCCGC TCGGTCCTCA ACGTCCAGGA GACGGTGGCC AAGGTGCTGC TGCTCGACCG GGAAGCGTTG ACCGCCGCGC AGGACGCCGG GGACGTGCTG GCCGCGCACC AGGTGGTCAT GGACGCCTTC TGGACCGACG TCCGCCCGCT GCTCGCCGCG TACCGCGAGG CCAAGGGCCT GCCCGCCGAC CCGATGACCG CCTACGCCGC GTCCGGCTAC CAGCAGCGCA TCGCCGCCGA GCGCGTCGGC GGCACCCAGG CCTCCTGGGG CGCCTGA
|
Protein sequence | MTSFDRIVPV LDRLAIEVPS WAYGNSGTRF KVFATPGTPR TPQEKIADAA KVHELTGLAP TVALHIPWDK VDDYAALRSF AQDHGVDLGT INSNTFQDDV YKLGSLTHRD PAVRRRAIDH HLECIEIMGR TGSRDLKIWL ADGTNYPGQG DIRARQDWLH ESLTEIYAHL GDEQRMVLEY KFFEPAFYHT DVPDWGTSYA HVNALGDKAF VCLDTGHHAP GTNIEFIVAQ LLRLGKLGSF DFNSRFYADD DLIVGAADPF QLFRILAEVA RGGGLDEGSP VALMLDQCHN IEDKIPGQIR SVLNVQETVA KVLLLDREAL TAAQDAGDVL AAHQVVMDAF WTDVRPLLAA YREAKGLPAD PMTAYAASGY QQRIAAERVG GTQASWGA
|
| |