| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0849 |
|---|
| Symbol | |
|---|
| ID | 8648359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 913150 |
|---|
| End bp | 916677 |
|---|
| Gene Length | 3528 bp |
|---|
| Protein Length | 1175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | TrwC relaxase |
|---|
| Protein accession | YP_003325441 |
|---|
| Protein GI | 269955652 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGTCT CGCTCAGGGT GATGAGCGCG GGGAAGGGGT ATCAGTACCT GCTGCGCTCG
GTCGCGGTCG GCGACGGCAA CCGCACGCTC GACATCCCGC TGACCCGCTA CTACGCCGAG
ACTGGCACCC CGCCAGGCCG CTGGCTCGGC AAGGGCGTGG CCGAGTTCGG CGCCGGTGAA
CTCTCCGCTG GCGACGTGGT GACGCAGGAG CAGCTCGCAC GTCTCCTGGG AGCGGGTTGC
GACCCGGTGA CTGGCGAGCC GCTCGGCCGT GCCTATGCCC GGTACGCGAC GGTCGACGAG
CGGATCGCCG CCCGTGTCGC GAGCCTCGAC GCCACCCTGA GTGATGGCGA CCGCGCGGCC
GCGATCGCGC ACATCCGGGC CGAGGAGGTC GCGACCGGCC CGCGTACCGC GGTCGCCGGG
TTCGACCTGA CCTTCTCGGT TCCGAAGTCC GTCTCGGTGC TGTGGGGCGT CGCCGACGAG
GACACTCAGG CGATGATCGT CGAGGCCCAC CACGCTGCGG TGGCTGAGGT GATGGGTCTC
TTCGAACGCG AGGTCGCCTT CTCCCGCACC GGCACGGATG CGGTGGCCAC GGTCGATGTC
GTCGGCATCG CCGCCACCGC CTACGACCAC TGGGACTCGC GCGCAGGGGA CCCTCAGCTA
CACACTCACG TCGTCGTCTC CAACCGGGCT CGGTCCGCGA CGGACGGCAA ATGGCGCACG
CTGTACTCGC GGCAGGTCCA CGGCTCCGTC GTCGCGCTGT CCGAGCACTA CAACGCGGTA
CTCGCCGACC GGCTTACCGG CACGTTCGGG GTCGGGTGGG AGCACCGCGA CAGGGGCAAG
GGGCGCTCGC GGGCGTTCGA GATCGCCGGC GTCCCCGACG GGCTCATCGA CGAGTTCTCG
TCGCGCACCC GTCACATCGA CGCCGCAGCG CAGCAGCTCG TCGCCGAGTA CGTCGCCCGT
CACGGGAAGC GGCCGTCCGG GGCGACGTAC TCGAAGCTGC GCGCGCAGGC GACGCTGGCC
ACGCGCCCAC CGAAGGAGCT GTACTCGCTC GCCGACCTGA CGGCGGGGTG GCGCGCCCGT
GCAGCGCGGC TGCTCGGGCG GGACCCGGTC GCGTGGGCGC ACGGCCTGAC GCACACGCCG
GGGGAGCGGG TGTGGCGGGC AGGCGACATC CCCGAGTCGT CGGTCGAGCA GGTGGCAGCG
AGCGTGCTGG CCGACGTCTC CGCCCGCCGG TCGACGTGGC GGCACTGGAA CCTGTGGGCC
GAGGCGTCGC GGCAGACGAT GGGCTGGCGG TTCGCGTCGG CGGAGGACCG CGAGGCCGTC
GTCGGGCGGA TCGTGGACCA GGCCAAACAC GCGTCCGTAG CGCTGACCCC GGCGGAGGCC
GCGCCGACGC CGACCGCGAT GCGCCGGGCC GACGGTGTGA GCTTCTTCCG TCCGCCGCAC
GCCACGGTGT TCTCCTCGCG CGAGACCCTC GACGCCGAGG ACCGCCTCCT CACGCTGGCC
ACCGACCGGA CGGCGCCGCA TGCGAGCGTC CGCGCCGTCG AAGCTGCGGT GGTGAAGCGG
TACGACGACG TCGCCCTTAG CGCGGAGCAA CAGGCGGCGC TCGAAGCCGT CGCGTCGTCG
GGCCGCCGCG TCGACCTCCT CGTCGGCCCT GCCGGAACCG GGAAGACGAC GGCCATGCAG
GCGCTGCTCC GCGCCTGGAC CGCCCAGCAT GGGAAGGGCT CCGTCGCCGG GCTCGCGCCG
TCGGCCGCCG CCGCGCAGGT CCTCGCAGAG GACCTCGGGA TCGCGACGGA GAACACCGCT
AAGTGGCTCC ACGAACGCGC CCGCGGACGC GCCACCTTCC AGCGCGGCCA GCTCGTCATC
GTCGACGAAG CCACCCTCGC CGACACTTCC ACCCTGCTGG CCATCGCCAA CCACGCACAG
GTCGCAGGCG CCAAGGTGCT GCTCGTCGGC GACTGGGCCC AACTCCAGTC CGTCGAAGCC
GGCGGCGCCT TCGCGCTCCT CGCCGACGCC CGCGATGACG TCGCCGAGCT CGGCGAGATC
CACCGCTTCA CCCACGCCTG GGAGAAGCCC GCTTCCCTCG CCCTGCGCAC CGGCGACACG
ACCGCCATCG ACGCCTACGA GTCCCACGCA CGCCTGCGCG GCGGCACCAC CGAGGAGATG
CTCGACGCCG CCTACGCCGC CTGGCGCGCC GACCACGCCG ACGGCAAGGC GACCCTCCTC
GTCACCGACT CCACCGCCAC CGTCCAAGCC CTCAACGCCA GAGCCCGCGC CGAACGCATC
ATCGACGGCG ACACCTCCAC CGGCCGCACC GTCGCGCTCG CGGACGGACT CTCGGCCTCG
GTGGGCGACC ACCTGATCAC CCGCCGCAAC GCCCGCCGCC TGACGACGCT GCGCGGCGGG
TGGGTCCGCA ACGGCGACCG GTGGAAGGTC CTCGACGTGC GGCGCAACGG GTCGGTGCTC
GCCGGGGCGA TGGACCAGGC GGGCAAGCAG CGCAGGGGAG CGACCGTCGT GCTCCCGCCG
TCATACGTGG CCGAGCACGT CGAGCTCGGG TACGCCGTCA CCGCCCACCG TGCCCAGGGG
ATGACCGTCG ACACGGCCCA CGTCGTCGTC GCGGGCGGCA CCACGCGGGA GAACCTCTAC
GTGTCGATGA CGAGGGGGCG CGAGTCGAAC ATCGCATACG TCGCACTCGA CAAACCCGAC
GAGACCCACG CGACACCGCA GCCCGAGGAC ATCACCGCAC GCTCAGTGCT GCACGGCGTG
CTCAACCACT CCGGCATCGA GCTGTCCGCG CACCAGACGA TCGACGCCGA GGCCAAGCGG
TGGGGGTCGA TCGCACAATT GGCGGCCGAG TACGAGACGA TCGCGGCGTT CGCGCAGCGG
CCCCGGTGGG AGCGGATCAT CCGGTCGTCC GGGCTGCGGC CCGAGGAGGC CGACGCGGCG
ATCGCGTCCC CGGCGATGGA TGCGCTCGCC GCGTCGCTGC GGCGGGCCGA GGCGCGCGGG
CTCCATGCTG ACGAACTCGT GCCGATGGTC GTGGCCGAGC GGACCGTCGC GGACGCCGAT
GACGTCGCCG CCGTCATCCG GCACCGCGTC GAGAGGGTCA CCGCGCGGCA CCGGGGGAAG
GTCCGGGGCC GACTCGTCGC CGGGCTCGTC CCGGCAGCCG TCGGTGTTGG CAACGACGAG
GTGCGCGAGG CGCTCGACCG GCGTCGAGAC CTCATGGAGG CACAGGCACT CGCTCTTGCG
GAGGAGGCGG TCGCGCACCG GCTGCCGTGG ACGCGAACGC TGGGGTCAGC GCCCCTTGGC
GTCGTCGACC GCATGCGGTG GATCACGGCC CTCTCCGTCA TCGCCGCGTA CCGAGACCGG
TACGACATCA CTAACTCCTC GCCCTTGGGG TCCGTACCCG GAACAGACCT CCAGGCAGCC
GACCGCGCTG CTGCCGAGGC AGCGGTGCGT CAGGCGCAGA CCGTGACCGC TGACCGCGAG
GGCAACGCCG CACTCGCTCC GCGAACGCCG ACACCCGTCG CGCGGTAG
|
|---|
| Protein sequence | MTVSLRVMSA GKGYQYLLRS VAVGDGNRTL DIPLTRYYAE TGTPPGRWLG KGVAEFGAGE
LSAGDVVTQE QLARLLGAGC DPVTGEPLGR AYARYATVDE RIAARVASLD ATLSDGDRAA
AIAHIRAEEV ATGPRTAVAG FDLTFSVPKS VSVLWGVADE DTQAMIVEAH HAAVAEVMGL
FEREVAFSRT GTDAVATVDV VGIAATAYDH WDSRAGDPQL HTHVVVSNRA RSATDGKWRT
LYSRQVHGSV VALSEHYNAV LADRLTGTFG VGWEHRDRGK GRSRAFEIAG VPDGLIDEFS
SRTRHIDAAA QQLVAEYVAR HGKRPSGATY SKLRAQATLA TRPPKELYSL ADLTAGWRAR
AARLLGRDPV AWAHGLTHTP GERVWRAGDI PESSVEQVAA SVLADVSARR STWRHWNLWA
EASRQTMGWR FASAEDREAV VGRIVDQAKH ASVALTPAEA APTPTAMRRA DGVSFFRPPH
ATVFSSRETL DAEDRLLTLA TDRTAPHASV RAVEAAVVKR YDDVALSAEQ QAALEAVASS
GRRVDLLVGP AGTGKTTAMQ ALLRAWTAQH GKGSVAGLAP SAAAAQVLAE DLGIATENTA
KWLHERARGR ATFQRGQLVI VDEATLADTS TLLAIANHAQ VAGAKVLLVG DWAQLQSVEA
GGAFALLADA RDDVAELGEI HRFTHAWEKP ASLALRTGDT TAIDAYESHA RLRGGTTEEM
LDAAYAAWRA DHADGKATLL VTDSTATVQA LNARARAERI IDGDTSTGRT VALADGLSAS
VGDHLITRRN ARRLTTLRGG WVRNGDRWKV LDVRRNGSVL AGAMDQAGKQ RRGATVVLPP
SYVAEHVELG YAVTAHRAQG MTVDTAHVVV AGGTTRENLY VSMTRGRESN IAYVALDKPD
ETHATPQPED ITARSVLHGV LNHSGIELSA HQTIDAEAKR WGSIAQLAAE YETIAAFAQR
PRWERIIRSS GLRPEEADAA IASPAMDALA ASLRRAEARG LHADELVPMV VAERTVADAD
DVAAVIRHRV ERVTARHRGK VRGRLVAGLV PAAVGVGNDE VREALDRRRD LMEAQALALA
EEAVAHRLPW TRTLGSAPLG VVDRMRWITA LSVIAAYRDR YDITNSSPLG SVPGTDLQAA
DRAAAEAAVR QAQTVTADRE GNAALAPRTP TPVAR
|
|---|
| |