| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0602 |
|---|
| Symbol | |
|---|
| ID | 8648110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 660641 |
|---|
| End bp | 661882 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003325199 |
|---|
| Protein GI | 269955410 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.101866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC GCCCCGCCGA CGTCGACCTG CGCCGGAACG CCCGCGCCGC ATGGGCCGTC
TTCGCCGTCT TCGCCGCGAG CGGCGCTACC TTCGCGACCT GGGTGTCGCG CCTGCCCGCG
GTGCGCGACG GACTGGACTT CACCCCCGGG CAGATGGGCG TGCTGCTGCT GACCGGCGCG
GTGGGCTCGG TCGTGGCGCT GCCCCTGTCG GGCATGATCA CCGCCCGCCT CGGCGCCGCC
CGCGCCGTGA CGACGTTCGC GCTCGTCGCC GTCGCCGGCT ACGCGCTCGT GTGCGTCGGT
GTCGGCACCG GTACCGCGCT CGCCGTGCGG GTCGGGCTGG TGGTCGCGGG CATCGGCTTC
GGCGTGTGGG ACGCCGCGAT GAACGTCGAG GGCGCCGTCG TCGAGCAGCG GCTCGGCCGT
TCGATCATGC CCCGGTTCCA CGCCGGCTTC TCGCTCGGCA CCGTCGCGGG CGCCGGGGTC
GGGTCGCTCG CCGCGCACGC CGGGGTGCCG TTCGTCTGGC ACGTGGGCGT CGGCGTCGCG
CTGACGGTGA CGACGGCGCT GGTGTGCGTC CGGGGGTTCC TCCCGACGCC GCACGCGGTC
CGGGCCGACG TGCCGGAACC CGACTGCGCC GACCCGGCCG AGGCGGCCCC CGCCCACGGG
CTGCGCGCCA CCATCGCCGC CTGGCGTGAG CCGCGCACGC TGCTGGTGGG ATTCGTGGTG
CTCGCGGCCG CGCTCACCGA GGGCGCCGCC AACGACTGGA CGGCCCTGTC CCTGGTGGAC
GGGTTCGGGG CCGCGGAGTC GACCGGGGCG TTCGCCCTCG CGCTGTTCCT GGCGGCCATG
ACGGTCACGC GGCTGGCCGG TACGCGGCTG GTCGACCGGT TCGGTCGCGT CACCGTCCTG
CGCGCCGGCT CGGTCGCCGC GCTCGTGGGC GTCGCCGTGT TCGCCTTCGC GCCCTGGCTG
TGGCTCGCCG TCGTCGGCAG CGTCGTGTGG GGGGCGTCGG CGGCGCTCGG GTTCCCCCTG
GGGATGTCCG CGGCGGCCGA CGAGCCGCAG CACGCCGCGA TGCGCGTCGC CGTCGTGTCG
ACCATCGGGT ACGCCGCCTT CTTCGTCGGG CCGGCGCTCA TCGGCCTGGT CGCCGATGTC
GTGGGGTTCC GGCACGCGCT CGTCGTCATC GCGCTGCCCG TCGTCGTCGG GCTGGCGCTG
GCGGGCAACG CGCGACCGCT GAGGGCGGAG CGGACGGCCT GA
|
|---|
| Protein sequence | MTTRPADVDL RRNARAAWAV FAVFAASGAT FATWVSRLPA VRDGLDFTPG QMGVLLLTGA
VGSVVALPLS GMITARLGAA RAVTTFALVA VAGYALVCVG VGTGTALAVR VGLVVAGIGF
GVWDAAMNVE GAVVEQRLGR SIMPRFHAGF SLGTVAGAGV GSLAAHAGVP FVWHVGVGVA
LTVTTALVCV RGFLPTPHAV RADVPEPDCA DPAEAAPAHG LRATIAAWRE PRTLLVGFVV
LAAALTEGAA NDWTALSLVD GFGAAESTGA FALALFLAAM TVTRLAGTRL VDRFGRVTVL
RAGSVAALVG VAVFAFAPWL WLAVVGSVVW GASAALGFPL GMSAAADEPQ HAAMRVAVVS
TIGYAAFFVG PALIGLVADV VGFRHALVVI ALPVVVGLAL AGNARPLRAE RTA
|
|---|
| |