Gene Xcel_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0227 
Symbol 
ID8647727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand- 
Start bp271091 
End bp271834 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003324824 
Protein GI269955035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.543112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTCG TCCGGACGTC GCACACCCAC GCCCACGCGG TGGACGCGGC GATCGAGCTG 
TTCTCCCGGC AGGGGTACGA GCAGACCACC GTCGAGGAGA TCGCCGACGC CGCCCAGGTC 
AGCCGCGCCA CGTTCTTCCG GCGGTACCGC TCCAAGGAGG ACGTGGTCTT CGCCGACCAC 
GAGCTGCTGC TCGAGGAGGT GACGGTCATG CTGGCCGCCA CCCGCCCCGA GGCGCGCGAC 
GACGGCGAAC GCGCCTGGGA CCCCGCCACC GCCCCGTACC TCGAGGTGTG CCGGGCCGCA 
CGCCTCGTGT TCGACCACCA CCTGGGCCAG CGCGCGACGT CGCTCGCCCG CTACCGGCTG 
CTGCAGCAGG TGCCCGCCCT GCGCGACCGC GAGCTGATCA CCACCCACCG GTACGAGCGC 
CTGTTCACGC GGTACCTGCG TGACACGCTG CCCGCCGACC GGTCCTCGAC GGTGCAGTCG 
ATCGCGTTCT CGGCCGGCGT CGTCGCCGTC CACAACGCGA TCCTGCGGCG CTGGCTGCGC 
CAGCCCGAGC TCGACCTGCG CCCCGAGCTC GAAGAGGCCT TCGCCGAGCT GCGCCGCGGC 
GCCACGGCCG ACCTGGCCCG CCGCGACCAG CCCGTCCCGA CGACGACGGT GTCGGCCGAC 
GGCGCCCGCG TCGTCGTCGT GCAGGTCGAC CCGGGGACGA CGGCGGAGAC CGTCGCCGAC 
GCGGTGCGCA CCGCGCTGGC GTGA
 
Protein sequence
MTVVRTSHTH AHAVDAAIEL FSRQGYEQTT VEEIADAAQV SRATFFRRYR SKEDVVFADH 
ELLLEEVTVM LAATRPEARD DGERAWDPAT APYLEVCRAA RLVFDHHLGQ RATSLARYRL 
LQQVPALRDR ELITTHRYER LFTRYLRDTL PADRSSTVQS IAFSAGVVAV HNAILRRWLR 
QPELDLRPEL EEAFAELRRG ATADLARRDQ PVPTTTVSAD GARVVVVQVD PGTTAETVAD 
AVRTALA