Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0114 |
Symbol | |
ID | 8647609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 123934 |
End bp | 125568 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | glycoside hydrolase family 39 |
Protein accession | YP_003324713 |
Protein GI | 269954924 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.747279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGTCG ACGCGTCGCC GTCAACCCTA CTGATCGACG GTCGTTCCCC GGCCGATGTC GCACTGCGGC ACATCTGGAA CGAGTGCATC GGCGCCGGGC GCGCCAACGA GGCGCTGCGT GCCGACTGGC AGAACCATTT CCGCGAGGCG GTGGACGTCC TCGGTGCCCG CTACGTGCGG TTCCACGGCA TCTTCCACGA CGACATGTTC GTGTACCGCG CCTCCGACGG CGGCGGGTTC GGCCCGGCCA CCGTGCTGGA GACCCCCGTC TACACCTTCG CGTACGTCGA CAAGGTGTTC GACGCGATCC TCGACGCCGG TGCACGCCCA TTCGTCGAGC TCGGCTTCAT GCCCCGTGAG CTCGCCACCC AGACCGAGAC CCTGTTCTGG TGGAAGGCGC ACTGCAGCCC ACCGAAGGAC ATGAACGCGT GGGTGGAGCT CGTCACCACG ACCGTCGACC ACTGGATCGA GCGCTACGGC ATCGACGAGG TGCGCACCTG GCCGTTCGAG GTGTGGAACG AGCCCAACCT GGTGCCGAAC TTCTGGACCG GGACGCGCAC CCAGTACTTC GAGCTGTACG AGGCGACCGC CACGGCGATC AAGGCGATCG ACCCGCAGCT TCGGGTCGGG GGCCCGTCCA CGAGCGTGTT CGTTCCCGAC GCGCGGTACG AGGGGGAGTA CCACGACCCG TCGCTCGAGG TCGAGACCGC GGTGGCGTCC GACCCCGACG ACCTCGACTG GCAGCCCGTC TGGATCCACG AGTTCATCGA GTACTGCGCA GAGCGTGACC TCCCGATCGA CTTCCTCTCG ACGCACCTCT ACCCGACCGA CTACGCGGCC GACTCGCTGG GCAAGGTGAG TGCGATCACG CGCCACAAGG ACGCCACGTA CGCGGACCTG CAGCTGATGC GCAAGATCAT CGAGAACAGC CCGTACCCGG ACGCCGAGCT GCACATCACC GAGTGGTCGA CCTCGCCCTC CAGCCGGGAC GCGATCCACG ACACGCTCTT CGCGGCGCCA TACATCGTGC GGGCCTTCCT CAAGGGCGCA CCGCTCGCAG AGTCGATCTC GTACTGGACG TTCACGGACG TGTTCGAGGA GGGCGGCGGC GGCATCGGCC CGTTCCACGG CGGCTTCGGC TTCGTCAACG AGAACGGCCT GCACAAGCCG ACGTTCCACG CGATGGCCAT GCTGGCCCGC CTCGGTGACC GCCTGCTGGC CGAGCTGCCC GACGGCGCCA TCACCCGCTC CTCCGCCACC GGCGACGTCG CCGCGATCTT CTACAACTAC CCGGCCGACA TGGGAAAGGC CGGGCTCGCC TCGCACCACC GCTACGCCGA CACGCGCCCC CTCGCCGACG TCGGACCCGC CAGCCGCGTC CAGCACACGA TCGAGGGCCT GACCCCGGGC GCACGCTTCG CCGTCGAGAT CCTCGACTGG GACCACGGCA ACGTCGCGGA GGCGTGGCAC CAGATGGGGG CACCGCGCAA CCTCTCGCGC CAGGACGTCG TCGACCTCCA GCACGTTGCC GACGGCCTCG ACCGCCGCAC CCTCGCGGTC GACGCCGACG GCGTCCTGAC CATCGACGTC GACCTCGCCC CGTGGGCCGT CATGTCGATC GCGCCAGCCG CCTGA
|
Protein sequence | MSVDASPSTL LIDGRSPADV ALRHIWNECI GAGRANEALR ADWQNHFREA VDVLGARYVR FHGIFHDDMF VYRASDGGGF GPATVLETPV YTFAYVDKVF DAILDAGARP FVELGFMPRE LATQTETLFW WKAHCSPPKD MNAWVELVTT TVDHWIERYG IDEVRTWPFE VWNEPNLVPN FWTGTRTQYF ELYEATATAI KAIDPQLRVG GPSTSVFVPD ARYEGEYHDP SLEVETAVAS DPDDLDWQPV WIHEFIEYCA ERDLPIDFLS THLYPTDYAA DSLGKVSAIT RHKDATYADL QLMRKIIENS PYPDAELHIT EWSTSPSSRD AIHDTLFAAP YIVRAFLKGA PLAESISYWT FTDVFEEGGG GIGPFHGGFG FVNENGLHKP TFHAMAMLAR LGDRLLAELP DGAITRSSAT GDVAAIFYNY PADMGKAGLA SHHRYADTRP LADVGPASRV QHTIEGLTPG ARFAVEILDW DHGNVAEAWH QMGAPRNLSR QDVVDLQHVA DGLDRRTLAV DADGVLTIDV DLAPWAVMSI APAA
|
| |