Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_5086 |
Symbol | |
ID | 5420497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009717 |
Strand | - |
Start bp | 306952 |
End bp | 309324 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640873740 |
Product | type IV secretion/conjugal transfer ATPase |
Protein accession | YP_001409520 |
Protein GI | 154243947 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCTTGC CTAACGTCGT CATTCTCAAA ACCCGCGAGC TCGAGCCCGA GACCTTCATC CCGTATGTCC GTCACGTGGA CGAGACGACG ATCGCGCTCG ATTCCCGGGC GCTGATGGTC ATGATTGCCC TCGACGGCAT ATCGTTCGAG ACGGCCGATC CGCTCGAACT CAACGGCCTT CATCGCGACC TCAACACGCT CTACCGCAAC CTCGCGGACG AACGCCTCGC GCTTTGGACC CACATCCTCC GTCGTCGCGA CAACGACTAT CCCGAGGGAG CGTTTGCCAA TCCCTTCTCC GCTGCCCTGA ACGCGAAATA TCGCGCCCGC ATGGTAGAGG AGGATCTCTT CCGCAACGAC CTCTATCTGA CCCTGCTGTG GTATCCGACC CGCGATCCCG CTGAGAAGAT CTCGAAGCTC CTGGGCCGCC TTCGCCGGGC GCGCCGCGGG AGCGTAGAGC TCGACGAGGA GGCGCTCAAG CAGTTGCGCG ACAAGGTCAC CGACGTGACG GCCGGCCTCA AGCGGTTCCA GCCACGTGTT CTTTCCCTCT ACGAACACGA TGGTCTTCTG TTTTCCGAGC CGAGTGAGGT CCTGCACCAG ATCATCGGCG GCCGGCGGGA ACGAGTGCCC CTCACGGAGG GGCGGGTTTC GTCAGCGATC TATTCCGACC GCGTCATCAT CGGTCGCGAG ACGGTGGAGA TCCGCCATGA GGCTGAGACC CGGTATGCAG GGATCTTCAG CTTCAAGGAA TATCCCGCCC GGACCAGGCC CGGCATGCTC GCTGGCGTCC TCACCACGCC GTTCGAGCTC ATCCTGACGC AGTCCTTCGC GTTCGCCTCA AAGGCCGATG CCCGGACCAT CCTGGGACGC AAGCAGAACC AGATGGTGAG CGCCGGCGAC AAGGCGAATT CGCAGGTCGA TGAGCTCGAT GGCGCCCTGG ACGAACTGGA ATCCAATCGC TTCGTGCTGG GCGAGCATCA CCTGACGCTG TCGGTCTTCG CCCCATCGGT GAAGGACCTC ACCGACAATC TGGCGAAGGC ACGCTCTCAT CTGACCAACG GCGGTGCCGT CGTGGCACGC GAGGACCTTG GCCTCGAAGC CGCCTGGTGG GCGCAGCTGC CTGGCAATTT CCGCTACCGG GCCCGCTCTG GTGCGATCAC CTCGCGCAAC TTTGCCGCGC TGTCGCCATT TCACTCCTAT CCGGTCGGCC GGAAGGACGG CAATGAATGG GGGCCGGCCG TCGCGATGCT CAAGACGGCC TCCGGCTCGC CGTTCTATTT CAACTTCCAC CATGGCGATC TCGGCAACAC CTTCGTGTGC GGCCCCTCTG GATCCGGCAA GACCGTTATC CTGAACTTCA TGCTCTCGCA GCTCGAGAAG CACGATCCCC ACATGGTGTT CTTCGACAAG GACCGTGGCG CCGATCTCTT CGTGCGGGCG GCGGGCGGCA CGTATCTGCC TCTGAAGAAT GGGACGCCAA CCGGCTGCGC GCCGCTGAAG GGGCTTGAGC TCACACCGGA GAACAAGGTG TTCCTGGCGC AATGGATCGC CAAGCTCGTC GGCTCAAAGT CGCGCGAGCT TTCCGTGAGT GACCTGCGCG ACATCGCCGG CGCCGTCGAC GGCCTCGCGG ACCTCCCGGT CCAGCGGCGC ACCATCGGCG CGTTGCGCAC CTTCCTCAAC AACACCGACC CGGAGGGCAT TGCCGCCCGG CTGCGGCGTT GGGAGAGGGG AGGGCCCCTC GGCTGGGTCT TCGACAACGA GACCGACGAC ATTGGCATCG GCGCCAAGTT CCTCGGCTAC GACATGACGG ATTTCCTCGA CAATGAGGAG ATCCGCACGC CGCTCATGGC CTACCTGTTC CACCGGGTGG AGCAGCTGAT CGACGGCCGC CGCATCATCA TCGTTATCGA CGAGTTCTGG AAGGCGCTGC TGGACGAGGG ATTTCGCGAC CTCGCCCAGA ACAAGCTCAA GACCATCCGG AAGCAGGGCG GCCTCATGCT CTTCGCGACG CAGAGCCCAC GCGATGCGAT CGCCTCGCCG ATCGCCCACA CCATCATCGA GCAGTGCCCG ACCCAGATCT TCATGCCGAA CCCGCGTGGC AGCCACGCCG ATTACGTGGA CGGCTTCAAG CTCACCGAGC GGGAATATCA GCTCATCGCG CGCGAGCTGT CCCCTGAAAG CCGCCGCTTC ATTGTCAAGC AGGGGCACAA CAGCGTCGTC GCCGAGCTGA ACCTCGCTGG CTTCGACGAC GAGCTCGCCG TCCTCTCCGG CCGCACCGCC AATGTCGAGC TGGCCGACGC GATCCGTGCG GAGGTCGGCA GCGGTCAGGA GGACTGGCTC CCCCTATTCC AACAAAGAAG GAGTCCCGGC TGA
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Protein sequence | MALPNVVILK TRELEPETFI PYVRHVDETT IALDSRALMV MIALDGISFE TADPLELNGL HRDLNTLYRN LADERLALWT HILRRRDNDY PEGAFANPFS AALNAKYRAR MVEEDLFRND LYLTLLWYPT RDPAEKISKL LGRLRRARRG SVELDEEALK QLRDKVTDVT AGLKRFQPRV LSLYEHDGLL FSEPSEVLHQ IIGGRRERVP LTEGRVSSAI YSDRVIIGRE TVEIRHEAET RYAGIFSFKE YPARTRPGML AGVLTTPFEL ILTQSFAFAS KADARTILGR KQNQMVSAGD KANSQVDELD GALDELESNR FVLGEHHLTL SVFAPSVKDL TDNLAKARSH LTNGGAVVAR EDLGLEAAWW AQLPGNFRYR ARSGAITSRN FAALSPFHSY PVGRKDGNEW GPAVAMLKTA SGSPFYFNFH HGDLGNTFVC GPSGSGKTVI LNFMLSQLEK HDPHMVFFDK DRGADLFVRA AGGTYLPLKN GTPTGCAPLK GLELTPENKV FLAQWIAKLV GSKSRELSVS DLRDIAGAVD GLADLPVQRR TIGALRTFLN NTDPEGIAAR LRRWERGGPL GWVFDNETDD IGIGAKFLGY DMTDFLDNEE IRTPLMAYLF HRVEQLIDGR RIIIVIDEFW KALLDEGFRD LAQNKLKTIR KQGGLMLFAT QSPRDAIASP IAHTIIEQCP TQIFMPNPRG SHADYVDGFK LTEREYQLIA RELSPESRRF IVKQGHNSVV AELNLAGFDD ELAVLSGRTA NVELADAIRA EVGSGQEDWL PLFQQRRSPG
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