Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4401 |
Symbol | |
ID | 5425193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 4881096 |
End bp | 4882133 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640883665 |
Product | nifR3 family TIM-barrel protein |
Protein accession | YP_001419279 |
Protein GI | 154248321 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAGAGA CTGTCGCATT TTCCATTCCG GCGTTGCGGA TCGGCTCCCA CGCGCTGCCC AATGCGGTGA TCCTCGCCCC CATGGCGGGA ATCACGGATG CACCGGTGCG GCGGATGGCT GTTCGTTACG GAGCCGGCCT CGTCATATCA GAAATGGTGG CGAGCGAAGC GCTGCTGGAA GGCCATCCCG AGATGGTACT TCGCGCGGAG GGGGAGGGCG TGCCGCTCCA CGCCGTGCAG ATCGCCGGCA ATGACCCGTA CCTGATGGGC GAGGCTGCCC GCGTGGCCGA GGCGGCCGGG GCTGGCATCA TCGATATCAA CATGGGCTGC CCGGCCAAGC GCGTCACCAC CGGAGCGGCC GGCGCCGCCC TGCTGCGCGA CCTGCCGCTG GCTCAAGCGA TTCTCGAAGC CGTGCGCGGC GCGGTCTCGA TCCCGGTCAC GGTGAAGACC CGGCTGGGCT GGGATGATAC GGCCTCCACG GCCGTGGATC TGGCGCGCAT GGCGCAGGAG AGCGGCCTTG CCATGGTCAC CATCCATGGC CGTACCCGCT GCCAGTTCTA TACCGGCCGC GCCGACTGGA CCGCCATCCG CGCAGTGAAG GACGCCGTCT CCATCCCGGT GATCGCCAAT GGCGACGTGA CGGCGCCGTC GGACGGCCCC GCCATCCTCG ACGCCTCCGG GGCGGATGGG GTGATGATCG GGCGCGGGGC GCAGGGCCGG CCGTGGTTTC CCGGCCGCGT CGCCCGCGCC ATCGCCGGTC AGCATGACAC CGCCGATCCG GACCTGGACG AGCAGCACGC GGTCTTGCTG GAGCTTTATG AGGGCTGGCT CGAGCTTTAT GGCCGGGCGT TGGGGGTGAG GCAGGCGCGC AAGCACGTGG GCTGGGCGCT GGACGCGGCC GCCGGCGGCA CCGGCGCGGC GCGGGCCGGC ATCGTGGCGG GCTGGCGCAA GCGTCTCCTC GTATTGGAGG ACCCCGCCCA GGTGAAGGCC GGCATCGGTG CCGCCTTCGA CGACATCATG TGGAGGGCCG CGGCATGA
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Protein sequence | MQETVAFSIP ALRIGSHALP NAVILAPMAG ITDAPVRRMA VRYGAGLVIS EMVASEALLE GHPEMVLRAE GEGVPLHAVQ IAGNDPYLMG EAARVAEAAG AGIIDINMGC PAKRVTTGAA GAALLRDLPL AQAILEAVRG AVSIPVTVKT RLGWDDTAST AVDLARMAQE SGLAMVTIHG RTRCQFYTGR ADWTAIRAVK DAVSIPVIAN GDVTAPSDGP AILDASGADG VMIGRGAQGR PWFPGRVARA IAGQHDTADP DLDEQHAVLL ELYEGWLELY GRALGVRQAR KHVGWALDAA AGGTGAARAG IVAGWRKRLL VLEDPAQVKA GIGAAFDDIM WRAAA
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