Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4174 |
Symbol | |
ID | 5421689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 4621513 |
End bp | 4622091 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640883431 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001419052 |
Protein GI | 154248094 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.524647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.907911 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTCTG ACGCACTGGG GCTGGGGCCA CGGACCGCCG GCTCGTCGGA GGACGGACTT GAGGAGCCCG CCGGGCTCGT CGAGGTTACC GGCTCCATCA AATGGTTCGA TGCCTCCAAG GGCTACGGCT TCATCGTCCC GGACGACGGC GGCCCCGATG TGCTGGTCCA TGTCACCTGC CTGCGGCGCG ACGGCTTCCA GACCGCCATG GAAGGCGCCC GCGTGGTCTG CGAGGCAGTC CAGCGGGCCA AGGGGCGGCA GGCCTTCCGG GTGCTCTCCC TCGACCTCTC GACCGCGGTG CATACTGCTC CGCCGCAGCC GCGCACCCGC ACGGTGGTGG AACCCAGGAG CGGTTTCGAG CCGGCCACGG TGAAATGGTT CAACCGGCTG CGCGGCTTCG GCTTCCTCAC CCAGGGGGAC GGCACGCCGG ACATCTTCGT CCATATGGAG ACGCTGCGCC GCCACGGCCT CACCGAACTT CGGCCCGGCC AGACGGTGAT GGTGCGCTAC GGCGACGGCG ATAAGGGCCT CATGGCCGCC GAAGTGAAGG CCGATACCGG ACCCAGCGGG AACACCTGA
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Protein sequence | MGSDALGLGP RTAGSSEDGL EEPAGLVEVT GSIKWFDASK GYGFIVPDDG GPDVLVHVTC LRRDGFQTAM EGARVVCEAV QRAKGRQAFR VLSLDLSTAV HTAPPQPRTR TVVEPRSGFE PATVKWFNRL RGFGFLTQGD GTPDIFVHME TLRRHGLTEL RPGQTVMVRY GDGDKGLMAA EVKADTGPSG NT
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