Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4008 |
Symbol | |
ID | 5423149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 4436904 |
End bp | 4438643 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640883262 |
Product | hypothetical protein |
Protein accession | YP_001418887 |
Protein GI | 154247929 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.487661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGATG AGCACGAGTT TCGCGTCCGG CCCGGCCGCA TCCGCTCGTC CCGTGCCCAG AGGTCCCGTC CCTTCATCGC CCAGGCCCTC GCCGCGGCCC AGAAGGCTGG CGGGCACGTC TCCCGATCCG GCCGCATCTC GCCCGGCGCG CGCTCGCATT TCGGCCGTGG CCGGACGGCA AGCATCGTCG CCAACCGACT GCTCACTGGG CTCTCGCGCA TCGTGGTGAT CAAGACCCGC GTGGTCCGGC ACACGGCGCG GGCTACGCCC CTCTCGGCTC ACCTCAGCTA TCTGCACCGG GAGGGTGTGA CCCGGGATGG AGAGAAGGCC CGCCTGTTCG GGCCGGGCGC CGAGGAGGGG GATGGCCGCG CCTTCGCGGA GCGATGCGCC GACGATCGGC ACCACTTCCG CTTCATCGTG TCGCCCGAGG ACGCGGCGGA CATGGCCGAC CTTCGATCCT TCGCCCGCGA CCTCGTCGGC CAGATGGAGA CGGACCTCGG CACCAAACTC GACTGGGTCG GCGTCGATCA CTGGAACACC GACAATCCCC ACCTGCACAT CCTGGTGCGT GGCCAGACCG ACGACGGCCA GGACCTCGTC ATCTCCCGCG ATTACATCAA GGAGGGCATG CGCGCCCGCG CACAGGATCT GGTCACCCAG GAGCTGGGGC CGCACACCGA CCTCGACATC CGCCGCGCCA TCGAGCGGCA AGTGGAGGCG GAGAGGTGGA CGCAGCTCGA CCGTCAACTG GTCCGGGACC AGCACGAGAC CGGCGTGATC GACGTCGCGC CCCATGCCGA TCGCCAGCCG GACGGGTTCC ATGCCCTGAA GGTCGGGCGA CTGCGCAAGC TCGAAACCCT CGGCTTCGCC GATCAGGTCG GCCCCGGCCA GTGGGTGATC GACGAGAAGG CCGAAGCGAC GCTCCGCGCG CTGGGCGAGC GCGGTGACAT CATCAAGCGG ATACACCGGG CCCTGACCGC GCAGGGCATC GAGCGCGGTA CAGCAAGCTA TGTGCTTTCC GGTGAGCGCC TCGATGCACC TATCATCGGC CGCCTGGTCG ATCGCGGGCT CGACGACGAG TTGAAGGGAT CCGCCTATGC CGTGGTCGAT GGCGTCGATG GACGCACCCA TCACATCCGG CTGCCCGACC TCGATTCGGC AGGCGATTGC GCTCCGGGCT CCATCGTCGA GCTGAGGAGG TTCGAGGATG CCCGGGGCCA ACAGCGGGCC GCGCTGGCGG TCCGCTCGGA CCTCGACATC GAGCGACAGG TCACGGCAGC CGGCGCCACC TGGCTCGACC GGCAGGCGCT CGCCCGCGAG CCCACCTCCC TCTCCGACAA CGGCTTCGGC GGCGATGTGC GGGACGCCAA GGACCGCCGT GCTGCACATC TGGTCGCCGA AGGCCTCGCC CAGCGTCAGG GCCAACACAT CGTCTTCGCT CGCGACCTCA TCGAGACGTT GCGCCGGCAG GAGATAAGCG CACTGGGCGA GCGGCTCGCC GCCGGGAACG GGCAGCCTTT CAAACGTGCC GGGACTGGTG AGTACGTCAC CGGCACCTAT CGCCAGCGCT TCGCCCTGGC CTCAGGCCGC TTCGCCATGA TCGACGACGG CCTCGGCTTC CAGCTCGTGC CCTGGACGCC CTCGCTCGAG AAGCAGCTCG GCAAGCACGT CTCCGGTGTC ACCCGGTCCG ATGGTGGCAT CGACTGGTCC TTCGGCCGCA AGCGCGGCCT CGGCCTCTGA
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Protein sequence | MADEHEFRVR PGRIRSSRAQ RSRPFIAQAL AAAQKAGGHV SRSGRISPGA RSHFGRGRTA SIVANRLLTG LSRIVVIKTR VVRHTARATP LSAHLSYLHR EGVTRDGEKA RLFGPGAEEG DGRAFAERCA DDRHHFRFIV SPEDAADMAD LRSFARDLVG QMETDLGTKL DWVGVDHWNT DNPHLHILVR GQTDDGQDLV ISRDYIKEGM RARAQDLVTQ ELGPHTDLDI RRAIERQVEA ERWTQLDRQL VRDQHETGVI DVAPHADRQP DGFHALKVGR LRKLETLGFA DQVGPGQWVI DEKAEATLRA LGERGDIIKR IHRALTAQGI ERGTASYVLS GERLDAPIIG RLVDRGLDDE LKGSAYAVVD GVDGRTHHIR LPDLDSAGDC APGSIVELRR FEDARGQQRA ALAVRSDLDI ERQVTAAGAT WLDRQALARE PTSLSDNGFG GDVRDAKDRR AAHLVAEGLA QRQGQHIVFA RDLIETLRRQ EISALGERLA AGNGQPFKRA GTGEYVTGTY RQRFALASGR FAMIDDGLGF QLVPWTPSLE KQLGKHVSGV TRSDGGIDWS FGRKRGLGL
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