| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3994 |
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| Symbol | |
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| ID | 5423888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4422856 |
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| End bp | 4424145 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640883249 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_001418874 |
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| Protein GI | 154247916 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.199092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.121156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG TGGGCGTCAT CGACACCTTC CTCAACACCT TCACCAGCTA CATCGATTCC
GGCTTCGGCC TGATCAAGGG CGAGGTGACG GGCCTCTCCT CCATCCTGAT CGCACTCGAC
ATCACGCTCG CCGGCCTGTT CTGGGCCTGG GGCGCCGACG AGGACGTGAT GCGCCGGCTG
GTGCGCAAAA CCCTCGCCAT CGGCTTCTTC GCCTGGATCA TCGGCAACTT CAACTCGCTC
TCGAAGATCG TGTTCGAGAG CTTCGCCGGG CTCGGCCTCA AGGCCGGCGG CTCCGCCATC
AGCACGGCGG AATTCCTGCG GCCGGGGCGA CTTGCGGAAG TGGGGCTCAC CGCCGCCCAG
CCGCTGCTCG ACGCCGCAAG CCAGCTCGCC GGGCCGGTGG CGATCTTCGT CAATGCCGTG
CAGATCGCCG TGCTGCTGGT CTCCTGGCTG CTGATCCTGA TCGCCTTCTT CATCCTGGCG
GTGCAGCTCT TCGTCACCCT CATCGAGTTC AAGCTGACGA CGCTCGCCGG CTTTGTGCTC
ATCCCCTTCG CTTTCTTCGG CAAGACCGCG TTCCTCGCCG AGAAGGTGCT CGGCAACATC
GTGGCGTCGG GCGTGAAGGT GATGGTGCTC GCTGTCATCA TCGGCATCGG CTCGGGGCTC
TTCTCCCAGT TCACCACCTC CTACGGCGAT GCCCAGCCCA CCATCAGCCA GGCGCTAGCC
GCGGTGCTGG CCGCGCTCGC GCTCCTCGGG CTCGGCATCT TCGGGCCGGG AATCGCCACG
GGACTGATCA CGGGCGCGCC GCAGCTCGGC GCCGGAGCCG CCGTGGGTAC GGGCCTTGCC
GCCGGCGGCA TGGCACTCGC CGGAGCCGGC GCCGCGGGCC TTGCCGTGCG TGGAGCCGGT
GCCGTGTTCT CGGGAGCCGC CGCTGCGGCG CGTGCGGGCG CGAGCCTCGC CGGGGGTGCT
GCATCCGCCT ACAGCGCGGG AGCCGCTGGC CAGTCCGGCC TTTCCGGTGT CGGGAGCGGT
TTGGGTGGCG TGGCGAGAGC AGCCGGCGCG GCCGCGACAT CTCCCTTGCA GCGCTCGGCC
GACACATCAG GCGAAGCGGC GGCCAGCAGC TCCGGCCCAG CCCCGTCGAG CAACCCGGCC
TCCTCCGGCG ATGCCCCCGA TTGGGCCCGG CGCATGCGCC GCTCCCAGCA GGTCGCCCAC
GGCATCCAGA CCGCGACCCA TGCCGTCCGA TCCGGCGACA GCCATGGCGG CGGGTCGTCC
ATCTCCCTCT CCGAAAGCGA TCGCCCATGA
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| Protein sequence | MNDVGVIDTF LNTFTSYIDS GFGLIKGEVT GLSSILIALD ITLAGLFWAW GADEDVMRRL
VRKTLAIGFF AWIIGNFNSL SKIVFESFAG LGLKAGGSAI STAEFLRPGR LAEVGLTAAQ
PLLDAASQLA GPVAIFVNAV QIAVLLVSWL LILIAFFILA VQLFVTLIEF KLTTLAGFVL
IPFAFFGKTA FLAEKVLGNI VASGVKVMVL AVIIGIGSGL FSQFTTSYGD AQPTISQALA
AVLAALALLG LGIFGPGIAT GLITGAPQLG AGAAVGTGLA AGGMALAGAG AAGLAVRGAG
AVFSGAAAAA RAGASLAGGA ASAYSAGAAG QSGLSGVGSG LGGVARAAGA AATSPLQRSA
DTSGEAAASS SGPAPSSNPA SSGDAPDWAR RMRRSQQVAH GIQTATHAVR SGDSHGGGSS
ISLSESDRP
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