| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3062 |
|---|
| Symbol | |
|---|
| ID | 5424449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3401545 |
|---|
| End bp | 3402294 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640882308 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001417949 |
|---|
| Protein GI | 154246991 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.35902 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGGC ATTCGCAATT CAAGAACATC ATGCACCGCA AGGGGCGGCA GGATGCGATG
CGCTCCAAGC TGTTCTCCAA GCTGGCGCGC GAAATCACCG TCTCGGCCAA GATGGGCCTG
CCCGATCCCA ACATGAACGC GCGCCTGCGC GCCGCCATTC TCGCGGCCCG CGCCGAGAAC
ATGCCCAAGG ACAATATCGA GCGCGCCATC AAGAAGGCGG CGGGCGCCGA CGGCGAGAAC
TATGACGAGA TCCGCTATGA GGGCTACGGC CCCGGCGGCG TCGCCGTCAT CGTCGAGGCC
CTGACCGACA ACCGCAACCG CACCGCCTCT GAAGTGCGCT CCTTCTTCAC CAAGTCGGGC
GGCAACCTCG CCGAGACGGG GGCGGTGTCC TTCATGTTCG ACCGGGTGGG CGCCATCGAG
TTCGCTGCCG AGAAGGCCGA CGCCGACGCC ATGATGGAAG CGGCCATCGA TGCCGGCGCG
GACGACGTGA CCTCCTCGGA GCACGGCCAC GAGGTGATCT GCGCGGCGGA GAGCCTTGCG
GAAGTGCAGC GCGCGCTGGA AGCCAAGTTC GGCGAGCCGA AGAAGGCAGC GCTGGTCTGG
CGGCCGCAGA ACACCGTCGC GGTGGACGAC GAGACCGGCG AGAAGCTGCT GCGCCTTGTT
GAAAACCTCG AGGACAACGA CGACGTGCAG AACGTCACCG CCAATTTCGA ACTGTCCGAC
GCGCTGCTCG CCAAACTGAA CGCGGAGTGA
|
|---|
| Protein sequence | MAGHSQFKNI MHRKGRQDAM RSKLFSKLAR EITVSAKMGL PDPNMNARLR AAILAARAEN
MPKDNIERAI KKAAGADGEN YDEIRYEGYG PGGVAVIVEA LTDNRNRTAS EVRSFFTKSG
GNLAETGAVS FMFDRVGAIE FAAEKADADA MMEAAIDAGA DDVTSSEHGH EVICAAESLA
EVQRALEAKF GEPKKAALVW RPQNTVAVDD ETGEKLLRLV ENLEDNDDVQ NVTANFELSD
ALLAKLNAE
|
|---|
| |