| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2512 |
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| Symbol | rimM |
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| ID | 5421519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2806887 |
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| End bp | 2807444 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640881766 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_001417411 |
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| Protein GI | 154246453 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.681752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGACC GCATCCTCGT CGCCCGCATC GGCGCCCCCC ATGGCGTGAG GGGCGAGGTG
CGCCTCTTCG TCTTCACCGA AGATCCCGGC GCGGTGCTGG ACTACGACCC GCTCACCGAC
GCCACCGGCA AGAAGCGCTT CCGCATCGCC GCCCTGCGCG CGGCCAAGGA CCATTTCGTC
GCCCGCATCG AGGGCATCGC CGATCGCACC GCGGCCGAGG CGCTGACCAA TTTGGACCTG
TTCGTCCCGC GCGAGGCCCT GCCGCCGCCG GACGACGACG ACACCTTCTA CCACGCCGAC
CTCATCGGCC TCGATGTCGT GGACGAGGCC GGCGTTGTGA TCGGCAAGGT GGTGGCGCTG
CAGGATTTCG GCGCCGGCGA CATCCTGGAA TATGCCCCCA CCCTGCCCGC CACCAAGGCC
AAGACCCTGA TGGTGCCGTT CTCAAAGGAT GCGGTGCCGG TGGTGGACGT GCCCGGCCGG
CGCGTGGTCG TCGCCGAAGC CTTCGTGGAA CGCCGCCCGG CAGAGCCGGA AGAGGGCGAG
GACACTGGGG GCGAGTGA
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| Protein sequence | MADRILVARI GAPHGVRGEV RLFVFTEDPG AVLDYDPLTD ATGKKRFRIA ALRAAKDHFV
ARIEGIADRT AAEALTNLDL FVPREALPPP DDDDTFYHAD LIGLDVVDEA GVVIGKVVAL
QDFGAGDILE YAPTLPATKA KTLMVPFSKD AVPVVDVPGR RVVVAEAFVE RRPAEPEEGE
DTGGE
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