| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2107 |
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| Symbol | |
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| ID | 5422690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2367137 |
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| End bp | 2368957 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640881359 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001417008 |
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| Protein GI | 154246050 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCG CGTGTGAGCC CTGCCCGGCG GCAAGGATCA AGGTGAGGCG CGACGGGCGA
GCCGAAACCG GCCGGCGCGC CGTTCGGGCG ACGGGGACGG GGATGACGGC CGACGGCGCC
GGCGATTTGG TTGGCGATTT CATGGGCTAT CTGGCGCGAT GCGGGCTGCT GCGGCCGGGC
GACGCCGTGC CTCTGCGCCC GGATGAGGTG CATTCGCCCG CCTCGTCCGC CACAAGCCCG
AAACCTTTGC GCAAGGTGTG GGAATCCACC GAGCTTGCCG CCGGCGATTT CGCCGATGCG
GTGGCCACCT TCTATCGCCT GCCGCGCGTG AGCCTGCCCG AGCTGATGGC GGCCCCCGCG
TTGGTGTCAC ACTTCTCGCC GCGCTTCCTG CGCGAGATGA CGGCGCTGCC CTATCGCGGC
GCCGATGGCG TGGTGCGCCT CGCCGTGGGC GATCCCACCG ACGGCGCAGT GCGGCGCGCC
GCCGAGATCG CCCTGGGCGA ACAGGTGGCG CTGGTGGTCG CCTCCTTCGA GGACATCGCC
ACTGTCCTCA CCGAGCGGCT TGGCGGCGAC GAGGCGCCAG CGGCGGGGAT CACGGACACC
GGCGGCGCGC GGGCCGATGA CGACATCGAC AGCCTGCGCG ACCTCGCCTC GGGCGCGCCG
GTGGTGCGCG CCGTCAACGA CCTTCTGGAA AAGGCCATGG AGCTGCGCGC CAGCGACATC
CATATCGGCC CGTTCCGGGG GACCATCGAG GTGCGCATGC GCATCGACGG GCTGCTGCGG
GTGGTGCCCG CGCCGGCCGA CGTGCTGCCG CAGGCGGTGA TCTCGCGCAT CAAGATCCTC
GCCGGCCTCG ATATCGCCGA GCGCCGCCTG CCGCAGGACG GCGCGGCGCG CCTGAAGCTC
GGGCGCTCCG AGATCGACGT GCGCGTGGCG CTGATGCCCA CCCAGCACGG CGAGGCGGCG
GTGATCCGCC TTCTCCCCCG CGACCGCGGC CTCCTGAACA TGGACAAGCT CGGCCTGTCG
CCGGGCGACG CAGACATCCT CAAGCGCCTG CTGGCGCTGC CCCACGGCAT GGTGGTGGTC
ACCGGTCCCA CCGGATCGGG CAAGACCACG ACGCTTGCCA CCATCCTCTC CATCCTGAAC
GAGCCCACGC GCAAGATCCT CACCATCGAG GACCCGGTGG AATATGAGAT CAAGGGCGTC
TACCAGTCGC AGGTGAAGCC CGCCATCGGG CTCACCTTCG CCGCTGCCCT GCGCTCCTTC
CTGCGCCACG ACCCAGACGT GATCATGGTG GGCGAGGTGC GTGATCCCGA GACCGCGCAC
ATCGCGGTCC ATGCGGCGCT CACCGGCCAT CTGGTGCTCA CCACGCTCCA CACTGACACG
GCGGCCGCCT CGGTGCCGCG CCTGCTGGAT CTGGGGGTGG AGGGCTTCCT GCTGAAGTCC
ACGTTGCGGG CGGTGATCGC CCAGCGCCTG GTGCGCCAGC TCTGCGACCG CTGCAAGCGC
CCGCGCACCC TCACCGCCAC CGACGTGGCC GACGATCCGC GCTTCTCGGC GCTGGGCTTT
GCGGCGGGGG AGACCGTGTA CGAGCCCAAG GGCTGCGAGC GCTGCGGCGG GGCCGGCTAT
CGCGGCCGGG TGGGGGTGTT CGAGATCCTC ACCCTGTCGG ACGAGATCCG CGAGATGATC
GACCGCCACG CCGGCGCCAG CGCCGTGGAC AAGGCGGCCA TCGCCGGCGG CATGACCACC
ATGCTGGACG ACGGCATCCT GAAATGCCGG GCCGGCATCA CCTCGCCGGC CGAGGTGCTG
CGCGTGACCA CCGTGCGCTG A
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| Protein sequence | MSGACEPCPA ARIKVRRDGR AETGRRAVRA TGTGMTADGA GDLVGDFMGY LARCGLLRPG
DAVPLRPDEV HSPASSATSP KPLRKVWEST ELAAGDFADA VATFYRLPRV SLPELMAAPA
LVSHFSPRFL REMTALPYRG ADGVVRLAVG DPTDGAVRRA AEIALGEQVA LVVASFEDIA
TVLTERLGGD EAPAAGITDT GGARADDDID SLRDLASGAP VVRAVNDLLE KAMELRASDI
HIGPFRGTIE VRMRIDGLLR VVPAPADVLP QAVISRIKIL AGLDIAERRL PQDGAARLKL
GRSEIDVRVA LMPTQHGEAA VIRLLPRDRG LLNMDKLGLS PGDADILKRL LALPHGMVVV
TGPTGSGKTT TLATILSILN EPTRKILTIE DPVEYEIKGV YQSQVKPAIG LTFAAALRSF
LRHDPDVIMV GEVRDPETAH IAVHAALTGH LVLTTLHTDT AAASVPRLLD LGVEGFLLKS
TLRAVIAQRL VRQLCDRCKR PRTLTATDVA DDPRFSALGF AAGETVYEPK GCERCGGAGY
RGRVGVFEIL TLSDEIREMI DRHAGASAVD KAAIAGGMTT MLDDGILKCR AGITSPAEVL
RVTTVR
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