Gene Xaut_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2023 
Symbol 
ID5420748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2280709 
End bp2282499 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content69% 
IMG OID640881275 
Productsignal transduction histidine kinase 
Protein accessionYP_001416924 
Protein GI154245966 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.175935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTGG GCAAGGCGGA GGCCGCACGG GCACGAAACA GGGAGCGCAG CTCCATCTTT 
GCCTCGGCAG TCGGGCAGCC GCGCACGCTT TTCGACAGCG TGCGGCGCCG CCTCGTCCTC
GTGGTCCTGC TCGCGCTGGC CCCCATCGCG GTGCTGAACA TCGTCCAGGG CGTGATGCAG
CTCTCCGATG CGGAGGAAGC TGCGCGCCAG CGCCTGCTGC AGCAGGCCGT GGCCGCCGCC
GTCAGCCAGC AGAACATCTT CGCCTCCACA GAAAACGTGC TCTATGCGCT CAAGAACGTG
GAAGAGGTGC GCGCGGCCGG CCAAAGCTGC GCGGCCACCC TGCGTGGCGC CACCATCAGC
CTGCCCTTCG CCGCCAATAT CGGCGTGCTC GATGCCCAGG GCAGGGTGAC CTGCGCCGCC
CTGCCCTTCC CCGGCCGCTC GGTGGGCGAG GAGCCCTGGT GGAAGGAGGC CATTGGCAGG
ACCGGCTTCA GCCTGGTAGG GCCGACGCGC AGCCCCGGTG CCAATCTGGA CGTGCTGGTG
GGCATCCTGC CGCTGCGCGA CGCCGCCGGG CGGCTGGAAG GCGCCATCGC CCTGGGCATC
GATATCAGAT GGCTCGACAA CCTGCTGAAG CAGCAGATCC CGCCCTCAGC GGGCATCGTC
GCCCTGTTCT CTAACCGGGG GCAGGAGCTG GTGTCCAATG CCCGGACCAT GAGCGCCGCC
CTGTTCCAGC GCGAGATGTT CCAGACCACC GGCCAGGACG TACGTAGCAA TCTCTACGAA
AACACCGATC CCGCCGGCAA GAGCTGGACC TTCGCCACCG CGCCGCTGGA CCGCGACGGC
CTCACCGTGG CCTTCGCCAT GCCCTCGGAC CGGCTGTTCG GCTGGACCTT CGTGACGGTG
GCGGCGAGCA TCGCCCTGCC GGCGCTCATC ATCATCCTGT CACTCGCCGC CCTGTGGGTG
GCGGTGGACC GCATCATCCT GCGCTGGCTG CTTTATCTGC GCCGGGTGAC GGCGGTCTAT
GCCCAGGGCC ACTACGGCTT CCGCCCTACC CGCCTCGGAG CGGCGCCCTC GGAATTCCGC
GTGCTCGGCC ATGCGGTGGA GAACATGGCC TTCGCCGTGC GCCACCGCGA CGCCCGCCTG
CGCGAGAACC TGGCCGAGAA GACCGCGCTG GTGCGCGAGA TCCACCACCG CATCAAGAAC
AGCCTGCAGG TGGTGGTGAG CCTGCTCAGC CTCTACGGAT CGGGTATCGG CAAGAGCGAG
GACCGCCGCC GCTTCGACCA GCTGCGGCTG CGGGTGAACA CCCTCGCCCT GGTCCACCGC
ATCCTCTACG AGGCCAATGA CGGTTCCCAG GTGCACCTGC GCGAGCTGCT CGGCGAGCTG
GCCTCGCTGA TCGAGGGCAG CACCGACGCC AACGTCCGCA TCACCGTGGA GGCGCAGGAT
GCGCCCCTGC CCACCGACAT GGCAGTACCC CTTGCCCTCA TGGTGGTGGA AGTGGCGCTC
AATCTCGCCC TGCCGCAGGG CACCGGGTCC GCTGCCGTGC TGTTGAGCGG AAGCCGGAAT
GGCGAGCGCC TCCATATCGC CCTGCGCAGC GCCACGGGGA CCTGGGACTC GAAAGGCTCG
GCCACCGACC TCGCCTCCGG ATTTGCCGCC CAGCTCGGAG GCAGCCTCGG CTGCCGCGAC
GAGGCCGGCG GCGGCCTGGT GGTGGCCGGC GACTTCCCCT GCCGCCCCAA CACAGGACCC
AGGACGACAG TACCCCGGAC CACAGGCCCC AATACCGGCC GCATGGCCTG A
 
Protein sequence
MDLGKAEAAR ARNRERSSIF ASAVGQPRTL FDSVRRRLVL VVLLALAPIA VLNIVQGVMQ 
LSDAEEAARQ RLLQQAVAAA VSQQNIFAST ENVLYALKNV EEVRAAGQSC AATLRGATIS
LPFAANIGVL DAQGRVTCAA LPFPGRSVGE EPWWKEAIGR TGFSLVGPTR SPGANLDVLV
GILPLRDAAG RLEGAIALGI DIRWLDNLLK QQIPPSAGIV ALFSNRGQEL VSNARTMSAA
LFQREMFQTT GQDVRSNLYE NTDPAGKSWT FATAPLDRDG LTVAFAMPSD RLFGWTFVTV
AASIALPALI IILSLAALWV AVDRIILRWL LYLRRVTAVY AQGHYGFRPT RLGAAPSEFR
VLGHAVENMA FAVRHRDARL RENLAEKTAL VREIHHRIKN SLQVVVSLLS LYGSGIGKSE
DRRRFDQLRL RVNTLALVHR ILYEANDGSQ VHLRELLGEL ASLIEGSTDA NVRITVEAQD
APLPTDMAVP LALMVVEVAL NLALPQGTGS AAVLLSGSRN GERLHIALRS ATGTWDSKGS
ATDLASGFAA QLGGSLGCRD EAGGGLVVAG DFPCRPNTGP RTTVPRTTGP NTGRMA