Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_1883 |
Symbol | |
ID | 5423981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 2123310 |
End bp | 2124104 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640881131 |
Product | pseudouridine synthase |
Protein accession | YP_001416785 |
Protein GI | 154245827 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.135329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCCTT CCGCGCCCAC GGCATCACCC CGTCCGCCTG AGCCCGCCCC CGACCTGCCG GTGCTTTACC GCGACGGCAT GATGTTGATC ATCGACAAGC CCCACGGCCT GCCGGTCCAT GCCGGCCCCA AGGGCGGGGA GACGCTGGCC GACCATCTCG ACGCCCTGCG CTTCGGCCTG CCCCGCGCGC CGGAGCTGGC CCACCGGCTC GACAAGGACA CCTCCGGCTG CCTGGTGCTG GGACGCCACG CCAAGGCTCT GGCATTGCTG GGGAAGCTGT TTGCCAACGG GAGCGTGGGC AAGACCTATT TGGCGGTGAC CCAGGGTTCG CCGGCGGAGG ATGCCGGCCG CATCGACCAG CCTCTGGCCA AGCGCTCGCC CCATCGCGGC TGGTGGATGC AGGCGGTGCC CAAGGGCACA CCCGGCGCGC AGGAGGCGAT CACCGACTAC CGCGTGCTCC ACCGCGCCGG CGGCTTCGCC GTGATGGCCC TCAGCCCGGT CACCGGCCGC ACCCACCAGC TGCGGGCGCA TCTGTCCAAC CTCGGCCACC CCATCTTCGG CGATGCCATC TATGGCGGCG CCTCCCGCCT GCCGGGCGGG CCGACGCTGC ACCTGCATTC CCGCCGTATC GTGGTGCCGC TTAAGGCCAA CGGCCCGGCG GTTGCGGCCA GCGCCCCTTT GCCGCCGCAT ATCTGCGAGA CGCTTTCGTC GCTGGGCCTT TCACCGGACG AGATCGGCCG CGCGGCGGAT GCGGTGGAAT GGGACGCCAA AATACCTGGC GCGAAGCGTC CATAG
|
Protein sequence | MTPSAPTASP RPPEPAPDLP VLYRDGMMLI IDKPHGLPVH AGPKGGETLA DHLDALRFGL PRAPELAHRL DKDTSGCLVL GRHAKALALL GKLFANGSVG KTYLAVTQGS PAEDAGRIDQ PLAKRSPHRG WWMQAVPKGT PGAQEAITDY RVLHRAGGFA VMALSPVTGR THQLRAHLSN LGHPIFGDAI YGGASRLPGG PTLHLHSRRI VVPLKANGPA VAASAPLPPH ICETLSSLGL SPDEIGRAAD AVEWDAKIPG AKRP
|
| |