Gene Xaut_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1780 
Symbol 
ID5421170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2006454 
End bp2007002 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content61% 
IMG OID640881028 
Productputative cytochrome c protein 
Protein accessionYP_001416682 
Protein GI154245724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.218363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.165005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTCAA CAGTCAATCT GAAGCGCGCC GGCGTTTTCT TCTTCGCCGC GTTCAGCTTT 
CAAGTGGTCG GCGCCAGCCT GCCCGCGTTC GCGGAATTCA CCCCTCCGGG TGACCCGAAG
CCGGTGAAGG AAGAGGACGG CAAATATTTC GATGCCTCCG GCGCTCCCAC CTACAACGTC
AAGCCTGACG GCACGGTGGA TTGGTTCACC TATTCCGGCT ACCGGCGCTA TCACGCCGAA
TGCCATGTCT GCCATGGCCC CGACGGCATG GGCTCCACCT ATGCGCCGGC CCTTATCGAT
TCGGTCAAGG CCATGAACTT CGACCAGTTC AGCGAAGTGG TGGTGGGCGG CCGGCAGAAC
ATCAGCAGCG GCAACGACAA GGTCATGCCG TCCTTCGGCC TGAACAAGAA TGTGATGTGC
TACCTGGACG ACATCTACGT CTACTTGCGC GCCCGTTCGA ACGATGCACT GGGCCGCGTG
CGTCCCGCGA AGCGGGATGA CAAGACGCAG GGAACCACCG ATGCGGAAAA AGCCTGCCTC
GGCGAGTAG
 
Protein sequence
MVSTVNLKRA GVFFFAAFSF QVVGASLPAF AEFTPPGDPK PVKEEDGKYF DASGAPTYNV 
KPDGTVDWFT YSGYRRYHAE CHVCHGPDGM GSTYAPALID SVKAMNFDQF SEVVVGGRQN
ISSGNDKVMP SFGLNKNVMC YLDDIYVYLR ARSNDALGRV RPAKRDDKTQ GTTDAEKACL
GE