| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1706 |
|---|
| Symbol | |
|---|
| ID | 5424785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 1922011 |
|---|
| End bp | 1923315 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640880952 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001416608 |
|---|
| Protein GI | 154245650 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0138275 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGCG ACGGACTTCG CCGCCCGCCT TCCTGTTCCC GCCGGGGACT TCTCGCCCTC
GCCGCGGTGC TGTTCAGCGC CGGCACGGCA CTGGCCCAGG CCCCCGCAGC GACGAGCGCA
CCAGCCACCA TATCCATCGG CTGCGTGCTG CCGCTGTCGG GCGGCTCGGC CTCTGTGGGC
AACCAGATCA AGGCCGGCAC CCAGATCGCG GTCGACCAGA TCAACCGCGA GGGCGGCATC
AAGTCCATGG GCGGGGCAAA ACTTGCGGTG CTGTTCGGCG ACAGCCAGTC CAAGGCCGAC
ATCGGCGTGA CCGAGACCGA GCGCCTGATC ACCCGCGAGA ATGTCGCCGC GCTGTGCGGC
GCCTTCAACT CGGCGGTCAC GTTCCCGGCC ACCGAGGTGG CGGAGCGCTA CAAGACCCCC
TGGGTGGTGC TCGGCGCGGT GAAGGACGAG ATCACCGAGC GCAATTTCAA ATATGTCTTC
CGCATCAACA ACAAGGCGAA CTACGACGCG CGTGAGCAGG TCGACGCCAT CGATTTGCTC
GCGCAGGAGA GCGGCAAGAA GCCGAAGACC ATCGCGCTCA TCTATGAGGG CTCCGACTGG
GGCCGCTCCC ACGCCGCGAA TATCAAGAAG TTCGCCGCCG AGCGCGGCTA CGCCGTGGTG
CTCGACGAAG CCGCGCCGCC CAACCAGGTC GACTTCTCCA ACCAGCTGCT GAAGGTGCGC
GCGAGCCGCC CCGACGTGCT CATCGTCGCC TTCTACACCC CCGATCACCT GATCCTGTCG
CGCCAGCTGA TGGACCAGCG GCTCGACATC CCCTTCGGCG TGCATTCGGT CGGCGGCGGC
ACCGAGGACC CGGCCTTCTA CAAGGCCATC GCGCCCCGCG CCGTGGATTA TTACTTCGTG
CAGGAAGACT TCCAGATCGA CATCGTCGAG GCCACCAAGG ATCCGGCCAT CCTCGATGCC
GACAAGCGAT CCAAGGAAAT GCTGGGCTAC GGCCTCACCG CCTATTCGGC CCAGGGCCTT
GCCACCATCT ATGTGATCCG GGATGCGCTG GAGCGCGCCG GCAGCGCCGA CCGCGAGAAG
CTGCGCGACG CCCTCGCCGC CACCGACATC GCCGCAGGTC CCGCCCTTGC CGCCGGCTAC
CAGCGCATCA AGTTCGATGC CCAGGGCCAG AACACCTTCG CCCACGGCGT GATCTCGGAG
AACCTCGGCG GCAAGCGCCG CACCGTGTGG CCGAAAGACA ACCGCCTGCC CGACACCAAG
CCCGTGTGGC CGGTGCCGGA GTGGTCCAAG CGACCCAATT CCTGA
|
|---|
| Protein sequence | MPSDGLRRPP SCSRRGLLAL AAVLFSAGTA LAQAPAATSA PATISIGCVL PLSGGSASVG
NQIKAGTQIA VDQINREGGI KSMGGAKLAV LFGDSQSKAD IGVTETERLI TRENVAALCG
AFNSAVTFPA TEVAERYKTP WVVLGAVKDE ITERNFKYVF RINNKANYDA REQVDAIDLL
AQESGKKPKT IALIYEGSDW GRSHAANIKK FAAERGYAVV LDEAAPPNQV DFSNQLLKVR
ASRPDVLIVA FYTPDHLILS RQLMDQRLDI PFGVHSVGGG TEDPAFYKAI APRAVDYYFV
QEDFQIDIVE ATKDPAILDA DKRSKEMLGY GLTAYSAQGL ATIYVIRDAL ERAGSADREK
LRDALAATDI AAGPALAAGY QRIKFDAQGQ NTFAHGVISE NLGGKRRTVW PKDNRLPDTK
PVWPVPEWSK RPNS
|
|---|
| |