Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_1695 |
Symbol | trpA |
ID | 5425391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 1907274 |
End bp | 1908119 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640880941 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_001416597 |
Protein GI | 154245639 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.674824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000673783 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGCATCCAG GCAGGCCCAT GACCACGCGC ATCTCCACCC GCTTCGCCGC GCTGAAAGAG GAAGGCCGCC CCGGCCTCGT CACCTTCGTC ACGGCGGGCG ATCCGGACGG GGAGACCTCC CTCGCCATCC TCAAGGCGCT GCCCGGCGCC GGCGCGGACG TGATCGAGCT GGGCATTCCC TTCACCGATC CCATGGCCGA CGGCCCGGCC ATCCAGGCGG CGGGCCTGCG CGCGCTCAAG GGCGGCCAGA CCCTGGCCAA GACCATCGAG ATGGTCCGGG TCTTCCGCAC CGAGGACACC ACCACGCCGG TGGTGCTCAT GGGCTATTTC AATCCCATCT ACATCTATGG CGTGGACCGC TTCCTCACCG ACGCCAAGGT GGCGGGGGTG GACGGCCTCA TCGTGGTGGA CCTGCCGCCG GAGGAGGACG ACGAGCTCTG CCTGCCAGCC CTGAACGCCG GGCTCGACTT CATCCGCCTC GCCACCCCCA CCACCGACGA CAAGCGCCTG CCGACGGTGC TCGAGCACAC GGCGGGCTTC GTCTATTACG TCTCCATCAC CGGCATCACC GGCTCGGCGA CGCCGGACGC GGATCTGGTG GCCGCCGCCG TCGCCCGCAT CAAGTCCCAC ACCGACCTGC CGGTGGCCGT GGGCTTCGGC GTGCGGACGC CGGAACAGGC CAAGGCCATC GCCGCCGGTG CCGACGCGGT GGTGGTGGGC TCCGCCCTGG TGGAGGTGGT GCGCCGCACC CTCGATGCCG AGGGCAACGC CACCGCCAAC ACCCTGCCGG GCGTGGAAGC GCTGGTGAGC GAACTGGCCG AGGCGGTGCG CAGCATCAAG CGCTGA
|
Protein sequence | MHPGRPMTTR ISTRFAALKE EGRPGLVTFV TAGDPDGETS LAILKALPGA GADVIELGIP FTDPMADGPA IQAAGLRALK GGQTLAKTIE MVRVFRTEDT TTPVVLMGYF NPIYIYGVDR FLTDAKVAGV DGLIVVDLPP EEDDELCLPA LNAGLDFIRL ATPTTDDKRL PTVLEHTAGF VYYVSITGIT GSATPDADLV AAAVARIKSH TDLPVAVGFG VRTPEQAKAI AAGADAVVVG SALVEVVRRT LDAEGNATAN TLPGVEALVS ELAEAVRSIK R
|
| |