| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1012 |
|---|
| Symbol | |
|---|
| ID | 5421868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 1162540 |
|---|
| End bp | 1163526 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640880259 |
|---|
| Product | patatin |
|---|
| Protein accession | YP_001415920 |
|---|
| Protein GI | 154244962 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3621] Patatin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTATC GCATCCTGTC TTTGGACGGC GGCAACGGCG GCAAGGCCGG CGTGTTCCTC
TCGACGCTGG AGCGCCGGGC CGAGGTGCTC GGCTTCAGCG TCCTGCGCCA GATCGACCTG
TTCGCCGGCA CCTCGAACGG CGCCGTCAAC GCGCTGCTGC TGGCGTGGTT CGATGATCCG
GTGCTGGCCT TCGAGGCGGT GCTGCGCTTC GATGACGAGG TGCGCGAGAG CCAGACGCCG
TGGTCCATCG CCGGCACCGT GCTGGGCAAC AATGCCGCCA TGACCACGGG GCGCATCAAG
ACGTTCTGCG ATGAGGTGTT CGGTGCCGGC GCCATCCTCG CCGACGTGAA GCGGCCGGTG
CTGGTCAACA CGGTGCAGCT CGACAACGCC CTCTCCGACG GGCAGCGCAG CTGGCTGCCG
CGCACTTTCA GCAATTTCCC CGGCGATCTC GGCCGGGTGG AGCTGATCGC GGACGTGGTG
CTGCGCACCA TGGCCATGCC GCTGCAATAT CCCATCTACC AGAGCGGGGC GCAGACCGGC
CCGGCCTATG TGGACGGGGC GGTGGCCTCC AACAATCCGG CGCTGACGGC GATCACCTCG
GCGCTGGCCC AGCAGAAGGC GCTGGAGGAC ATCGCCCTTC TGTCCATCGG CACGCCGCGC
AACCTCGCGG GCCAGTCCCG TTATCTTTCG CCCGGCCTGT CCGAGGGCAG CGCCGACTGG
GGCTATCGCC AGTGGCTGCT GGATCCGTTC AACCCGCTGG TGCTGGTGGA CCTGTTCCTG
CAGGCCGGCG CCGCCGCCAC CAGCGCCCAG TGCGCCCAGC TTCTGGGCTC GCGCTTCCGC
CGCGTCGATC CGCCGGTGTT CACCGGGCCG GCCTGGGACG CGCCGGAAAC CAATGCGGTG
CTGGACACCA CCGTGGACTG GCTCAACGCC CACGGCTGGA ACGATCCCGC CGCCGCCGTG
AAGGCGCCGG CAGCTCCCGT TTCGTGA
|
|---|
| Protein sequence | MTYRILSLDG GNGGKAGVFL STLERRAEVL GFSVLRQIDL FAGTSNGAVN ALLLAWFDDP
VLAFEAVLRF DDEVRESQTP WSIAGTVLGN NAAMTTGRIK TFCDEVFGAG AILADVKRPV
LVNTVQLDNA LSDGQRSWLP RTFSNFPGDL GRVELIADVV LRTMAMPLQY PIYQSGAQTG
PAYVDGAVAS NNPALTAITS ALAQQKALED IALLSIGTPR NLAGQSRYLS PGLSEGSADW
GYRQWLLDPF NPLVLVDLFL QAGAAATSAQ CAQLLGSRFR RVDPPVFTGP AWDAPETNAV
LDTTVDWLNA HGWNDPAAAV KAPAAPVS
|
|---|
| |