Gene Xaut_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0392 
Symbol 
ID5424821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp420923 
End bp421573 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID640879638 
Producthypothetical protein 
Protein accessionYP_001415307 
Protein GI154244349 
COG category[R] General function prediction only 
COG ID[COG3683] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0855106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGC GCACCGTGAC GGTCGCCCTG AGCCTTGTGA CCGCGCTCCT GTTCGCCGCC 
CTGGCGCCGC GCCCGGCGCA GGCGCACCCC CATGTGTGGG TCACCATGAA GAGCGAGCTG
GTCTACGATG CCAGCGGCCG CCTCACCGGG GTGAAGCAGA TCTGGACCTT CGACGATGCC
TTCTCTGCCT TCGCCCTGCA GGGCATGGAG AAGCAGAAGG ACGGCAGCTA TGGCGACGAT
GTGCTGAAGC CCCTCGCCGA GGTGAACGTC ACGTCCCTGA AGGAATACAA CTACTTCGTG
GTGGGCAAGA CGGCGACCAC CAAGCTCGCC TTCAAGGACC CCGTCGACTA TTTCCTCACC
TATGAGAACG AGTTGCTCAC CCTGCACTTC ACCCTGCCGC TGGAAAAGCC GGTGGCAGCG
AAGGGGACCA CCTCACTCGA GATCTACGAT CCCACCGCCT TCGTCTCCTT CTCCTTCAAC
GAGAAGGATC CGGTGAAGCT CATTTCCGCC CCGGGCGGCT GCACCCAGGA GGTGATCTCC
CCGGAGCCGC CGGCGAGCGG GACGCTGAAC GAGGCCTTCT TCTCGAACCT CACCTCGGCC
AGCACCTATG GCGCCCAGTT CGCCGACAAG ATCACGGTGA AATGCCCGTG A
 
Protein sequence
MTPRTVTVAL SLVTALLFAA LAPRPAQAHP HVWVTMKSEL VYDASGRLTG VKQIWTFDDA 
FSAFALQGME KQKDGSYGDD VLKPLAEVNV TSLKEYNYFV VGKTATTKLA FKDPVDYFLT
YENELLTLHF TLPLEKPVAA KGTTSLEIYD PTAFVSFSFN EKDPVKLISA PGGCTQEVIS
PEPPASGTLN EAFFSNLTSA STYGAQFADK ITVKCP