Gene Xaut_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0026 
Symbol 
ID5424996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp25733 
End bp26530 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content73% 
IMG OID640879271 
ProductABC transporter related 
Protein accessionYP_001414942 
Protein GI154243984 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.757841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC AGGAAGCGCC GGCGCTGGAA ATCCGCGCGG TCAGCCACGC CTTCGGCGCC 
CGGCGCGCCC TCGACGACGT GTCGCTGACC GTCCCGGCGG GGCGCTTCGT GGCGCTGCTC
GGGCCCAATG GCGCGGGCAA GACCACCCTG TTCTCGCTGG CGACGCGGCT CTACAGCACG
CGCGAAGGCG CGGTGCGCAT CTTCGGCCGC GACCTCGCCT CCGCACCATC GGCGGCGCTG
GCGGAGCTGG GGGTGGTGTT CCAGAACCGG ACGCTGGACC TCGACCTCAC CGTCAACCAG
AATCTCGCCT ACCACGGCGC CCTGCACGGC CTTTCCGGCC GGCCGCTGAA GGCGCGCATC
TCGGCGCTGC TGCATCTGGT GGGCCTCGCC GACCGGCTGC ACGAGAAGGT GCGCACCCTT
TCTGGCGGGC AGGCGCGGCG GGTGGAGATC GCCCGCGCCC TCATCCATCG CCCGCGCCTG
CTGCTGCTGG ACGAGGCCAC CGTGGGCCTC GACCTTTCTT CCCGCGCCGC CATCGTGGAC
ATCGTGCGCC GGCTGGTGGC CGAGGATGGC CTCGCGGTGC TGTGGGCCAC CCACATCTTC
GACGAGGTAC ATCCGGAGGA CGACATCTAC GTGCTCGACA AGGGCCGCAT CATCGCCCAC
GGCACCGCCG GCGAGGTGGC CGGCGGCCAT CTCGCCCCCG CCCGCCCCGA GGCGGAACCT
GTCCCCGAGG GCGGCACGGC CGCGCTGGAA GCCGCCTTCC GCGCCATGAC GGCGGCCCGC
GCCGGGGATG CGGCATGA
 
Protein sequence
MNDQEAPALE IRAVSHAFGA RRALDDVSLT VPAGRFVALL GPNGAGKTTL FSLATRLYST 
REGAVRIFGR DLASAPSAAL AELGVVFQNR TLDLDLTVNQ NLAYHGALHG LSGRPLKARI
SALLHLVGLA DRLHEKVRTL SGGQARRVEI ARALIHRPRL LLLDEATVGL DLSSRAAIVD
IVRRLVAEDG LAVLWATHIF DEVHPEDDIY VLDKGRIIAH GTAGEVAGGH LAPARPEAEP
VPEGGTAALE AAFRAMTAAR AGDAA