Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | WD1293 |
Symbol | |
ID | 2738553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
Kingdom | Bacteria |
Replicon accession | NC_002978 |
Strand | + |
Start bp | 1233040 |
End bp | 1233771 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637173444 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | NP_967003 |
Protein GI | 42521088 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.991698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAAGT TAGAAGGTAA AGTAGCTTTA ATCACCGGAG CTTCAGGTGG AGTAGGCTCT GCTGTTGCAA AAAGGTTTAT AAGAGAAGGT GCATGTGTGA TTCTGATTTC AAGATCTCTT GATAATCTCA AGCCACTATA TAATGAAATT GAAGAGCTTG AAGAATTTAA AGAAGGCTCT GTGAAACTAA TTCAGCTTGA TCTTTTAGAC TTTGAGAATG TAAAGATACT GACAAACATG ATAGAAAGCC TGAAATTATC AGAATCTGGA GCACTTGATA TATTAGTTGC GTGTGCTGGA ATTTTAGGCA AACTGAACCC CATTCATGAC TGTGAGATTG AAGAGCTACA GAACGTAATG AATACAAATT TTACTGCCAA TTGGTACTTA CTAAAAAACT TAGATCCAAT GCTAAAAAAG TCTAATGCTG GAAGAGCGAT ATTCATGACC TCAGAAGTGA CACTTTCTCC TTCCTCTTAT CCATATTGGA TGCCGTATGC TGCAAGTAAA GTTGCACTAG AAATAATGGT GCAGATATAT GCATCTGAGA CAAAACATAC AAAATTATGT GTAAATGCTG TATACACGGA AGGACCTGTG GGTAGTGAGC AGGCATTTCC TGGATCTGAA TTGGTGTCAC CTGATAAACT AACAGATAAA TTTGTGGAAT TAGCTTCTGA AGACTGCAGC ATATCAGGAA AAATCTTACC GCTCAGCAAA TCTCCCGAAT AA
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Protein sequence | MGKLEGKVAL ITGASGGVGS AVAKRFIREG ACVILISRSL DNLKPLYNEI EELEEFKEGS VKLIQLDLLD FENVKILTNM IESLKLSESG ALDILVACAG ILGKLNPIHD CEIEELQNVM NTNFTANWYL LKNLDPMLKK SNAGRAIFMT SEVTLSPSSY PYWMPYAASK VALEIMVQIY ASETKHTKLC VNAVYTEGPV GSEQAFPGSE LVSPDKLTDK FVELASEDCS ISGKILPLSK SPE
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