Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | WD0532 |
Symbol | rpsB |
ID | 2738587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
Kingdom | Bacteria |
Replicon accession | NC_002978 |
Strand | - |
Start bp | 518417 |
End bp | 519265 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637172726 |
Product | 30S ribosomal protein S2 |
Protein accession | NP_966310 |
Protein GI | 42520395 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00675401 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAATT TGCCTAAAGT CACTGTGCGT GATTTAGCTG AATCTGGTGT ACATTTTGGT CACAAAATTA GTCGCTGGAA CGCAAAAATG GCTCCATACA TATATGGAGT GCATCAAGAA AATCGTATAC ATATAATTGA TTTGCGAAAA ACACTACCAT TGCTACAGGT GGCCATGAAG GCTTTATATG ACGTTGCATT TCAAGGTGGT CGCATTCTAT TTGTTGGTAC AAAGTTTCAA GCTTTTGATA TTATTGCAAG TGAAGCGATT CGTTGTGGTC AATATTATGT GAATCATCGT TGGCTTGGTG GTATGCTTAC TAATTGGGGC ACTGTTTCTT CTTCGATAAA AACCTTGATG CAATATGAGA AAATATTAAA TGACGAGGAT AGCATTTTAA CAAAGAAAGA ATTGGGAAAC ATTGAAAAGA AAAAGCAAAA GCTTGATAAG GCGCTTGGCG GTATTAGAGA AATGGGAGCA ATTCCTGATA TCTTATTCAT CATTGATACT AATAAAGAGC ATATAGCGGT TAAGGAGGCT AAGAAGTTAG GAATTCCAAT AGTTGCAATA CTTGATACTA ATTCTGATCC AGATGGTATT ACTTATCTAA TACCTGGAAA TGATGACTCA AGAAAATCAA TAGAGCTCTA TTGTAAATTA GCTACCGACT CTATATTAGC TGGAATAGAG TCTAGTCTAG CAAAATCTGG AGTTAAGATT GATGATATAA GGGGTGATGA GTTTATTCAA GAAAAAGAAG ATGGTATTGT GCAAACTAAA AGGAGACGTA GTAAAGTTTA CAAAGAAGAA GAAAGGGAGG TAGTAACAAA TGAAGATGAA TCCAGATGA
|
Protein sequence | MTNLPKVTVR DLAESGVHFG HKISRWNAKM APYIYGVHQE NRIHIIDLRK TLPLLQVAMK ALYDVAFQGG RILFVGTKFQ AFDIIASEAI RCGQYYVNHR WLGGMLTNWG TVSSSIKTLM QYEKILNDED SILTKKELGN IEKKKQKLDK ALGGIREMGA IPDILFIIDT NKEHIAVKEA KKLGIPIVAI LDTNSDPDGI TYLIPGNDDS RKSIELYCKL ATDSILAGIE SSLAKSGVKI DDIRGDEFIQ EKEDGIVQTK RRRSKVYKEE EREVVTNEDE SR
|
| |